RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 ITGADQ13349 1161 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 SLC36A3Q495N2 470 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 CLEC12AQ5QGZ9 265 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 ADCK1Q86TW2 530 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 ZNF519Q8TB69 540 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 MAGEE2Q8TD90 523 aaPredicted RBP13.72□□□□□ -0.21
TRIM13-201ENST00000356017 ERMAPQ96PL5 475 aaPredicted RBP13.72□□□□□ -0.21
TRIM13-201ENST00000356017 TSSK6Q9BXA6 273 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 MRPL13Q9BYD1 178 aaKnown RBP13.72□□□□□ -0.21
TRIM13-201ENST00000356017 SMURF2Q9HAU4 748 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 TAS2R16Q9NYV7 291 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 GLTPQ9NZD2 209 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 INTS1Q8N201 2190 aaKnown RBP13.72□□□□□ -0.21
TRIM13-201ENST00000356017 RPL36A-HNRNPH2H7BZ11 118 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 UPK3AO75631 287 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 TRMUO75648 421 aaKnown RBP13.72□□□□□ -0.21
TRIM13-201ENST00000356017 PPP1R3DO95685 299 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 TP53P04637 393 aaPredicted RBP13.72□□□□□ -0.21
TRIM13-201ENST00000356017 IGFBP5P24593 272 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 MPGP29372 298 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 ESRRGP62508 458 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 ZBTB49Q6ZSB9 765 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 LNX2Q8N448 690 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 TMEM54Q969K7 222 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 Q96M85 177 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 RBP7Q96R05 134 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 USB1Q9BQ65 265 aaKnown RBP13.72□□□□□ -0.21
TRIM13-201ENST00000356017 ALG12Q9BV10 488 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 TEX12Q9BXU0 123 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 PLA2G12AQ9BZM1 189 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 USE1Q9NZ43 259 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 GPR52Q9Y2T5 361 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 ORC6Q9Y5N6 252 aa13.72□□□□□ -0.21
TRIM13-201ENST00000356017 TEX13CA0A0J9YWL9 993 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 C16orf97H3BN30 126 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 M0R3G1 203 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 BHLHE40O14503 412 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 ARHGEF9O43307 516 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 PSMB1P20618 241 aaKnown RBP13.71□□□□□ -0.22
TRIM13-201ENST00000356017 COX5AP20674 150 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 POU1F1P28069 291 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 ALDH3A2P51648 485 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 SORDQ00796 357 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 RUNX1T1Q06455 604 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 DAG1Q14118 895 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 STK11Q15831 433 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 HIST3H3Q16695 136 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 THEM4Q5T1C6 240 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 SFRP5Q5T4F7 317 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 SLC27A4Q6P1M0 643 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 STAC2Q6ZMT1 411 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 CBR4Q8N4T8 237 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 NOXO1Q8NFA2 376 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 OR8D4Q8NGM9 314 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 ALKBH3Q96Q83 286 aaPredicted RBP13.71□□□□□ -0.22
TRIM13-201ENST00000356017 KCNK17Q96T54 332 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 ULBP2Q9BZM5 246 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 CRLF2Q9HC73 371 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 C8orf4Q9NR00 106 aa13.71□□□□□ -0.22
TRIM13-201ENST00000356017 PCNX1Q96RV3 2341 aa13.7□□□□□ -0.22
TRIM13-201ENST00000356017 EI24O14681 340 aa13.7□□□□□ -0.22
TRIM13-201ENST00000356017 ALPLP05186 524 aa13.7□□□□□ -0.22
TRIM13-201ENST00000356017 CDH2P19022 906 aaPredicted RBP13.7□□□□□ -0.22
TRIM13-201ENST00000356017 UGT2B10P36537 528 aa13.7□□□□□ -0.22
TRIM13-201ENST00000356017 GIPRP48546 466 aa13.7□□□□□ -0.22
TRIM13-201ENST00000356017 CRISP1P54107 249 aa13.7□□□□□ -0.22
TRIM13-201ENST00000356017 SH3BGRP55822 239 aaPredicted RBP13.7□□□□□ -0.22
TRIM13-201ENST00000356017 MYBPC1Q00872 1141 aa13.7□□□□□ -0.22
TRIM13-201ENST00000356017 ROR2Q01974 943 aaKnown RBP13.7□□□□□ -0.22
TRIM13-201ENST00000356017 CD47Q08722 323 aa13.7□□□□□ -0.22
TRIM13-201ENST00000356017 FAM27E3Q08E93 113 aa13.7□□□□□ -0.22
TRIM13-201ENST00000356017 KRR1Q13601 381 aaKnown RBP13.7□□□□□ -0.22
TRIM13-201ENST00000356017 ANKRD34AQ69YU3 496 aa13.7□□□□□ -0.22
TRIM13-201ENST00000356017 OR7E24Q6IFN5 339 aa13.7□□□□□ -0.22
TRIM13-201ENST00000356017 CXorf67Q86X51 503 aaPredicted RBP13.7□□□□□ -0.22
TRIM13-201ENST00000356017 SYT14Q8NB59 555 aa13.7□□□□□ -0.22
TRIM13-201ENST00000356017 STEAP2Q8NFT2 490 aa13.7□□□□□ -0.22
TRIM13-201ENST00000356017 HDAC2Q92769 488 aaKnown RBP13.7□□□□□ -0.22
TRIM13-201ENST00000356017 KISS1RQ969F8 398 aaPredicted RBP13.7□□□□□ -0.22
TRIM13-201ENST00000356017 OR10A4Q9H209 315 aa13.7□□□□□ -0.22
TRIM13-201ENST00000356017 GPR35Q9HC97 309 aa13.7□□□□□ -0.22
TRIM13-201ENST00000356017 TMEFF2Q9UIK5 374 aaPredicted RBP13.7□□□□□ -0.22
TRIM13-201ENST00000356017 PRSS37A4D1T9 235 aa13.69□□□□□ -0.22
TRIM13-201ENST00000356017 SOCS2O14508 198 aa13.69□□□□□ -0.22
TRIM13-201ENST00000356017 IGFBP1P08833 259 aaPredicted RBP13.69□□□□□ -0.22
TRIM13-201ENST00000356017 IGHV1-2P23083 117 aa13.69□□□□□ -0.22
TRIM13-201ENST00000356017 IL32P24001 234 aa13.69□□□□□ -0.22
TRIM13-201ENST00000356017 RAD23AP54725 363 aa13.69□□□□□ -0.22
TRIM13-201ENST00000356017 LGALS3BPQ08380 585 aa13.69□□□□□ -0.22
TRIM13-201ENST00000356017 TRIP10Q15642 601 aa13.69□□□□□ -0.22
TRIM13-201ENST00000356017 MESTQ5EB52 335 aa13.69□□□□□ -0.22
TRIM13-201ENST00000356017 JAZF1Q86VZ6 243 aa13.69□□□□□ -0.22
TRIM13-201ENST00000356017 WDFY1Q8IWB7 410 aa13.69□□□□□ -0.22
TRIM13-201ENST00000356017 C1orf162Q8NEQ5 155 aaPredicted RBP13.69□□□□□ -0.22
TRIM13-201ENST00000356017 RASD2Q96D21 266 aa13.69□□□□□ -0.22
TRIM13-201ENST00000356017 SNX18Q96RF0 628 aa13.69□□□□□ -0.22
TRIM13-201ENST00000356017 RNPEPL1Q9HAU8 725 aa13.69□□□□□ -0.22
TRIM13-201ENST00000356017 CIB4A0PJX0 185 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 PRSS44E7EML9 344 aa13.68□□□□□ -0.22
TRIM13-201ENST00000356017 MGRN1O60291 552 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms