RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 NME2P1O60361 137 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 VIPR2P41587 438 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 HABP2Q14520 560 aaPredicted RBP11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 MOB3CQ70IA8 216 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 SLC35D2Q76EJ3 337 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 ANKLE1Q8NAG6 615 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 CLEC1AQ8NC01 280 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR52E1Q8NGJ3 308 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 RYDENQ9NUL5 291 aaKnown RBP11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 SMAD6O43541 496 aaKnown RBP11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 KLF8O95600 359 aaPredicted RBP11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 TEAD1P28347 426 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 ZNF93P35789 620 aaPredicted RBP11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 PMPCAQ10713 525 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 SSX7Q7RTT5 188 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 TMEM231Q9H6L2 316 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 TAS2R5Q9NYW4 299 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 B3GALT5Q9Y2C3 310 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 RD3LP0DJH9 198 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 ITGB7P26010 798 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 MTCP1P56278 107 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 DCAF7P61962 342 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 BPHLQ86WA6 291 aaPredicted RBP11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 TMEM217Q8N7C4 229 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 FOXN4Q96NZ1 517 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 SLC23A1Q9UHI7 598 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 AK3Q9UIJ7 227 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 ARFGEF2Q9Y6D5 1785 aa11.75□□□□□ -0.53
SYNCRIP-201ENST00000355238 F6UZH7 168 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 ANGPTL7O43827 346 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 PRDX1Q06830 199 aaKnown RBP11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 SLC36A2Q495M3 483 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 RTP2Q5QGT7 225 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 IL34Q6ZMJ4 242 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 TMEM182Q6ZP80 229 aaPredicted RBP11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 PLXDC1Q8IUK5 500 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 GCNT2Q8N0V5 402 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 GABRG1Q8N1C3 465 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR6K3Q8NGY3 331 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 VN1R3Q9BXE9 311 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 SLIRPQ9GZT3 109 aaKnown RBP11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 NARFLQ9H6Q4 476 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 APOBEC3BQ9UH17 382 aaKnown RBP11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR6C68A6NDL8 312 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 BET1O15155 118 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 DUSP1P28562 367 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 MARCH8Q5T0T0 291 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 ESPNLQ6ZVH7 1005 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 OLIG1Q8TAK6 271 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 SECTM1Q8WVN6 248 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 CHST2Q9Y4C5 530 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 CLDN1O95832 211 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 CFIP05156 583 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 AKAP12Q02952 1782 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 POU3F1Q03052 451 aaPredicted RBP11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 FAHD1Q6P587 224 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR2L13Q8N349 312 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 TEAD3Q99594 435 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 PLEKHA2Q9HB19 425 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 ZNF586Q9NXT0 402 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 GLTPD2A6NH11 291 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 MCRIP1C9JLW8 97 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 ZNF264O43296 627 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 OR7C1O76099 320 aaPredicted RBP11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 EIF4EP06730 217 aaKnown RBP11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 LIPIQ6XZB0 460 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 SYT9Q86SS6 491 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 TMEM25Q86YD3 366 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 LRFN5Q96NI6 719 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 GPR174Q9BXC1 333 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 VDAC3Q9Y277 283 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 CBY3A6NI87 242 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 TAPBPO15533 448 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 AQP8O94778 261 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 PDGFBP01127 241 aaPredicted RBP11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 ARNTP27540 789 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 IL2RGP31785 369 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 RGRP47804 291 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 COTL1Q14019 142 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 RPUSD3Q6P087 351 aaKnown RBP11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 RHOUQ7L0Q8 258 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 PRR22Q8IZ63 422 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 MFSD9Q8NBP5 474 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 AKR7LQ8NHP1 331 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 DOK1Q99704 481 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 SLC23A2Q9UGH3 650 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 PCDHB10Q9UN67 800 aa11.74□□□□□ -0.53
SYNCRIP-201ENST00000355238 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 ADRA2CP18825 462 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 PAX6P26367 422 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 MRPL19P49406 292 aaKnown RBP11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 MZT1Q08AG7 82 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 CPXM2Q8N436 756 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 SLC6A18Q96N87 628 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 ABHD6Q9BV23 337 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 TMPRSS5Q9H3S3 457 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 ASH2LQ9UBL3 628 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 B4GALT3O60512 393 aa11.73□□□□□ -0.53
SYNCRIP-201ENST00000355238 CD14P08571 375 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms