RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 RUNX2Q13950 521 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 SLC25A30Q5SVS4 291 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 MRPL2Q5T653 305 aaKnown RBP8.58□□□□□ -1.04
SMG6-202ENST00000354901 ZNF322Q6U7Q0 402 aaPredicted RBP8.58□□□□□ -1.04
SMG6-202ENST00000354901 THSD4Q6ZMP0 1018 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 TTLL10Q6ZVT0 673 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 MBOAT2Q6ZWT7 520 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 ASPGQ86U10 573 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 OR4K14Q8NGD5 310 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 OR52L1Q8NGH7 329 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 CMTM3Q96MX0 182 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 DERL3Q96Q80 235 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 CLCC1Q96S66 551 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 CALML5Q9NZT1 146 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 OPN4Q9UHM6 478 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 MOKQ9UQ07 419 aa8.58□□□□□ -1.04
SMG6-202ENST00000354901 IRGMA1A4Y4 181 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 CTSVO60911 334 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 TEAD1P28347 426 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 SDHAP31040 664 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 NUBP1P53384 320 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 DLX5P56178 289 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 RPS21P63220 83 aaKnown RBP8.57□□□□□ -1.04
SMG6-202ENST00000354901 MAT1AQ00266 395 aaKnown RBP8.57□□□□□ -1.04
SMG6-202ENST00000354901 PON3Q15166 354 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 RNLSQ5VYX0 342 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 ACBD7Q8N6N7 88 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 COX18Q8N8Q8 333 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 POGLUT1Q8NBL1 392 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 MFSD9Q8NBP5 474 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 TMEM68Q96MH6 324 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 CD180Q99467 661 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 SDF2Q99470 211 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 RAB11FIP5Q9BXF6 653 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 WDR13Q9H1Z4 485 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 CCDC86Q9H6F5 360 aaKnown RBP8.57□□□□□ -1.04
SMG6-202ENST00000354901 TRPV4Q9HBA0 871 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 MED9Q9NWA0 146 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 UNC119BA6NIH7 251 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 ZNF729A6NN14 1252 aaPredicted RBP8.57□□□□□ -1.04
SMG6-202ENST00000354901 M0R036 132 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 GALR3O60755 368 aaPredicted RBP8.57□□□□□ -1.04
SMG6-202ENST00000354901 PMP2P02689 132 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 ATF1P18846 271 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 C5AR1P21730 350 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 ABCD3P28288 659 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 NNATQ16517 81 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 DECR1Q16698 335 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 ODF4Q2M2E3 257 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 UNQ6494/PRO21346Q6UXR6 183 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 ZNF485Q8NCK3 441 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 OR1E3Q8WZA6 343 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 CNTNAP3BQ96NU0 1288 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 TIMM29Q9BSF4 260 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 MTHFD2LQ9H903 347 aaPredicted RBP8.57□□□□□ -1.04
SMG6-202ENST00000354901 OR2S2Q9NQN1 319 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 SIDT1Q9NXL6 827 aaKnown RBP8.57□□□□□ -1.04
SMG6-202ENST00000354901 WASF3Q9UPY6 502 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 DENND4AQ7Z401 1863 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 PRSS38A1L453 326 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 DUXAA6NLW8 204 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 TCAPO15273 167 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 UBL3O95164 117 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 GP1BAP07359 652 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 HTR1FP30939 366 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 PITPNAQ00169 270 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 RELQ04864 619 aaPredicted RBP8.57□□□□□ -1.04
SMG6-202ENST00000354901 DYRK1AQ13627 763 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 COTL1Q14019 142 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 RAB30Q15771 203 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 RNF212Q495C1 297 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 ZNF542PQ5EBM4 170 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 EOGTQ5NDL2 527 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 POMZP3Q6PJE2 187 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 TSSK4Q6SA08 328 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 TGIF2LXQ8IUE1 241 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 FAM219AQ8IW50 185 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 BEST3Q8N1M1 668 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 ARL14Q8N4G2 192 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 ARIH2OSQ8N7S6 290 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 GTF3AQ92664 365 aaKnown RBP8.57□□□□□ -1.04
SMG6-202ENST00000354901 MOAP1Q96BY2 351 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 ZNF764Q96H86 408 aaPredicted RBP8.57□□□□□ -1.04
SMG6-202ENST00000354901 PTCHD1Q96NR3 888 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 ATG101Q9BSB4 218 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 COLEC10Q9Y6Z7 277 aa8.57□□□□□ -1.04
SMG6-202ENST00000354901 H7C1Q1 480 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 PSMD9O00233 223 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 ACTL6AO96019 429 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 IFNGR1P15260 489 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 LAP3P28838 519 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 PYCR1P32322 319 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 MAGEB1P43366 347 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 PTH2RP49190 550 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 ZNF136P52737 540 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 FXYD6P3P58550 94 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 SHC2P98077 582 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 TFF2Q03403 129 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 OR1Q1Q15612 314 aa8.56□□□□□ -1.04
SMG6-202ENST00000354901 YOD1Q5VVQ6 348 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms