RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 YIPF5Q969M3 257 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 ARHGDIGQ99819 225 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 FOXB1Q99853 325 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 TMEM43Q9BTV4 400 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 CMAHPQ9Y471 501 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 NOX1Q9Y5S8 564 aa13.64□□□□□ -0.23
PDGFA-201ENST00000354513 PATE4P0C8F1 98 aa13.63□□□□□ -0.23
PDGFA-201ENST00000354513 IFNGR1P15260 489 aa13.63□□□□□ -0.23
PDGFA-201ENST00000354513 GLRXP35754 106 aa13.63□□□□□ -0.23
PDGFA-201ENST00000354513 ALDH3B1P43353 468 aa13.63□□□□□ -0.23
PDGFA-201ENST00000354513 PTDSS1P48651 473 aaKnown RBP13.63□□□□□ -0.23
PDGFA-201ENST00000354513 EVX1P49640 407 aa13.63□□□□□ -0.23
PDGFA-201ENST00000354513 CBX1P83916 185 aa13.63□□□□□ -0.23
PDGFA-201ENST00000354513 PMS2P3Q13401 168 aa13.63□□□□□ -0.23
PDGFA-201ENST00000354513 SELPLGQ14242 412 aa13.63□□□□□ -0.23
PDGFA-201ENST00000354513 KRT73Q86Y46 540 aa13.63□□□□□ -0.23
PDGFA-201ENST00000354513 TMEM54Q969K7 222 aa13.63□□□□□ -0.23
PDGFA-201ENST00000354513 SYT3Q9BQG1 590 aa13.63□□□□□ -0.23
PDGFA-201ENST00000354513 SPATA5L1Q9BVQ7 753 aa13.63□□□□□ -0.23
PDGFA-201ENST00000354513 ASPNQ9BXN1 380 aa13.63□□□□□ -0.23
PDGFA-201ENST00000354513 ULBP2Q9BZM5 246 aa13.63□□□□□ -0.23
PDGFA-201ENST00000354513 RACGAP1Q9H0H5 632 aa13.63□□□□□ -0.23
PDGFA-201ENST00000354513 ZNF385DQ9H6B1 395 aa13.63□□□□□ -0.23
PDGFA-201ENST00000354513 TMEFF2Q9UIK5 374 aaPredicted RBP13.63□□□□□ -0.23
PDGFA-201ENST00000354513 FZR1Q9UM11 496 aa13.63□□□□□ -0.23
PDGFA-201ENST00000354513 FAM157AC9JC47 383 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 M0R233 179 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 SYNGR3O43761 229 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 CCDC22O60826 627 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 OPN1SWP03999 348 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 ITGA2P17301 1181 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 PPIBP23284 216 aaKnown RBP13.62□□□□□ -0.23
PDGFA-201ENST00000354513 COL8A2P25067 703 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 GIPRP48546 466 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 NCALDP61601 193 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 RAB39AQ14964 217 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 DUSP7Q16829 419 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 AGKQ53H12 422 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 SWT1Q5T5J6 900 aaKnown RBP13.62□□□□□ -0.23
PDGFA-201ENST00000354513 PXKQ7Z7A4 578 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 RBM45Q8IUH3 476 aaKnown RBP13.62□□□□□ -0.23
PDGFA-201ENST00000354513 SKA3Q8IX90 412 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 PAQR4Q8N4S7 273 aaPredicted RBP13.62□□□□□ -0.23
PDGFA-201ENST00000354513 SMYD1Q8NB12 490 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 CCDC197Q8NCU1 140 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 HIPK4Q8NE63 616 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 CLDND2Q8NHS1 167 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 EPYCQ99645 322 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 TMEM27Q9HBJ8 222 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 SAR1AQ9NR31 198 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 MRGBPQ9NV56 204 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 POFUT2Q9Y2G5 429 aa13.62□□□□□ -0.23
PDGFA-201ENST00000354513 C11orf98E9PRG8 122 aa13.61□□□□□ -0.23
PDGFA-201ENST00000354513 RP2O75695 350 aa13.61□□□□□ -0.23
PDGFA-201ENST00000354513 SERPINI2O75830 405 aa13.61□□□□□ -0.23
PDGFA-201ENST00000354513 TCN1P20061 433 aaPredicted RBP13.61□□□□□ -0.23
PDGFA-201ENST00000354513 DVL1P1P54792 670 aaPredicted RBP13.61□□□□□ -0.23
PDGFA-201ENST00000354513 BIDP55957 195 aa13.61□□□□□ -0.23
PDGFA-201ENST00000354513 RAB1AP62820 205 aa13.61□□□□□ -0.23
PDGFA-201ENST00000354513 RUNDC3AQ59EK9 446 aa13.61□□□□□ -0.23
PDGFA-201ENST00000354513 ARMC8Q8IUR7 673 aa13.61□□□□□ -0.23
PDGFA-201ENST00000354513 RFLNBQ8N5W9 214 aa13.61□□□□□ -0.23
PDGFA-201ENST00000354513 OR6T1Q8NGN1 323 aa13.61□□□□□ -0.23
PDGFA-201ENST00000354513 OR6N1Q8NGY5 312 aa13.61□□□□□ -0.23
PDGFA-201ENST00000354513 OR5J2Q8NH18 312 aa13.61□□□□□ -0.23
PDGFA-201ENST00000354513 RNF217Q8TC41 542 aa13.61□□□□□ -0.23
PDGFA-201ENST00000354513 MCHR1Q99705 422 aa13.61□□□□□ -0.23
PDGFA-201ENST00000354513 B3GAT2Q9NPZ5 323 aa13.61□□□□□ -0.23
PDGFA-201ENST00000354513 TAS2R5Q9NYW4 299 aa13.61□□□□□ -0.23
PDGFA-201ENST00000354513 REV1Q9UBZ9 1251 aa13.61□□□□□ -0.23
PDGFA-201ENST00000354513 DYSFO75923 2080 aa13.6□□□□□ -0.23
PDGFA-201ENST00000354513 PRORSD1PA6NEY8 169 aa13.6□□□□□ -0.23
PDGFA-201ENST00000354513 CHP2O43745 196 aa13.6□□□□□ -0.23
PDGFA-201ENST00000354513 FMO6PO60774 539 aa13.6□□□□□ -0.23
PDGFA-201ENST00000354513 ERCC1P07992 297 aaPredicted RBP13.6□□□□□ -0.23
PDGFA-201ENST00000354513 ADORA3P0DMS8 318 aa13.6□□□□□ -0.23
PDGFA-201ENST00000354513 CD247P20963 164 aa13.6□□□□□ -0.23
PDGFA-201ENST00000354513 SLC6A2P23975 617 aa13.6□□□□□ -0.23
PDGFA-201ENST00000354513 CSNK1A1P48729 337 aa13.6□□□□□ -0.23
PDGFA-201ENST00000354513 CRYBA2P53672 197 aa13.6□□□□□ -0.23
PDGFA-201ENST00000354513 MELKQ14680 651 aa13.6□□□□□ -0.23
PDGFA-201ENST00000354513 ZNF74Q16587 644 aa13.6□□□□□ -0.23
PDGFA-201ENST00000354513 ZNF613Q6PF04 617 aa13.6□□□□□ -0.23
PDGFA-201ENST00000354513 RINLQ6ZS11 566 aa13.6□□□□□ -0.23
PDGFA-201ENST00000354513 RETREG3Q86VR2 466 aa13.6□□□□□ -0.23
PDGFA-201ENST00000354513 RANBP3LQ86VV4 465 aaPredicted RBP13.6□□□□□ -0.23
PDGFA-201ENST00000354513 LRRC17Q8N6Y2 441 aa13.6□□□□□ -0.23
PDGFA-201ENST00000354513 ZNF607Q96SK3 696 aa13.6□□□□□ -0.23
PDGFA-201ENST00000354513 ZNF426Q9BUY5 554 aa13.6□□□□□ -0.23
PDGFA-201ENST00000354513 ARMCX1Q9P291 453 aa13.6□□□□□ -0.23
PDGFA-201ENST00000354513 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.6□□□□□ -0.23
PDGFA-201ENST00000354513 CPSF4LA6NMK7 179 aaKnown RBP13.59□□□□□ -0.23
PDGFA-201ENST00000354513 VSTM5A8MXK1 200 aa13.59□□□□□ -0.23
PDGFA-201ENST00000354513 TCF21O43680 179 aa13.59□□□□□ -0.23
PDGFA-201ENST00000354513 DCTN3O75935 186 aa13.59□□□□□ -0.23
PDGFA-201ENST00000354513 UBL3O95164 117 aa13.59□□□□□ -0.23
PDGFA-201ENST00000354513 MT-ATP6P00846 226 aa13.59□□□□□ -0.23
PDGFA-201ENST00000354513 PGA4P0DJD7 388 aa13.59□□□□□ -0.23
PDGFA-201ENST00000354513 PGA3P0DJD8 388 aa13.59□□□□□ -0.23
PDGFA-201ENST00000354513 AHCYP23526 432 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms