RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 HPP00738 406 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 AMD1P17707 334 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ELAVL4P26378 380 aaKnown RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 PSMB3P49720 205 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 PGGT1BP53609 377 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ZNF79Q15937 498 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 PRICKLE2Q7Z3G6 844 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 OR6N2Q8NGY6 317 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 LMF1Q96S06 567 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ORAI3Q9BRQ5 295 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ELOVL1Q9BW60 279 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ZDHHC11Q9H8X9 412 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ZDHHC4Q9NPG8 344 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 SUSD2Q9UGT4 822 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 PADI1Q9ULC6 663 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 CLEC4EQ9ULY5 219 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 C17orf102A2RUQ5 167 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 A6NLC8 198 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 SURF4O15260 269 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ZNF207O43670 478 aaKnown RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 SLC35G4P0C7Q5 338 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 AKR1C3P42330 323 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 HTR6P50406 440 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 Q499Y3 187 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 MRM1Q6IN84 353 aaKnown RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 ZNF66Q6ZN08 573 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 TMEM179BQ7Z7N9 219 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 PHYKPLQ8IUZ5 450 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 FBXO16Q8IX29 292 aaPredicted RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 PUSL1Q8N0Z8 303 aaKnown RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 CARFQ8N187 725 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 OR5M1Q8NGP8 315 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 LKAAEAR1Q8TD35 194 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 SLC25A44Q96H78 314 aaPredicted RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 PIMREGQ9BSJ6 248 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 PARD6GQ9BYG4 376 aaPredicted RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 ACPTQ9BZG2 426 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 LTB4R2Q9NPC1 389 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 PLEKHB1Q9UF11 243 aaPredicted RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 TP53TG5Q9Y2B4 290 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ZNF850A8MQ14 1090 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 OR1F1O43749 312 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ZNF354AO60765 605 aaPredicted RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 USP2O75604 605 aaPredicted RBP4.67□□□□□ -1.66
SKP1-202ENST00000353411 CST4P01036 141 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 PSEN2P49810 448 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 TP53I3Q53FA7 332 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 Q6ZTK2 550 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 ASB17Q8WXJ9 295 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 SRMSQ9H3Y6 488 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 SPG21Q9NZD8 308 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 FLVCR2Q9UPI3 526 aa4.67□□□□□ -1.66
SKP1-202ENST00000353411 C7orf77A4D0Y5 90 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 MEIS3P1A6NDR6 274 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 CT45A8P0DMV1 189 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 CT45A9P0DMV2 189 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 HOXB3P14651 431 aaPredicted RBP4.66□□□□□ -1.66
SKP1-202ENST00000353411 PRDX3P30048 256 aaKnown RBP4.66□□□□□ -1.66
SKP1-202ENST00000353411 NOVA1P51513 510 aaKnown RBP4.66□□□□□ -1.66
SKP1-202ENST00000353411 PRPS1P60891 318 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 HSD11B2P80365 405 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 TIGD5Q53EQ6 642 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 CT45A2Q5DJT8 189 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 SLC18B1Q6NT16 456 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 LYG2Q86SG7 212 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 ANGPTL5Q86XS5 388 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 OR52E2Q8NGJ4 325 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 ZNF514Q96K75 400 aaPredicted RBP4.66□□□□□ -1.66
SKP1-202ENST00000353411 OPN4Q9UHM6 478 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 PCDHGC4Q9Y5F7 938 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 LOC100289279A0A1B0GTE1 492 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 UBE2CO00762 179 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 PMP2P02689 132 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 HOXB5P09067 269 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 OR8U8P0C7N1 319 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 MPC1LP0DKB6 136 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 CD68P34810 354 aaPredicted RBP4.66□□□□□ -1.66
SKP1-202ENST00000353411 PLA1AQ53H76 456 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 TMEM201Q5SNT2 666 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 AGTRAPQ6RW13 159 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 PRSS45Q7RTY3 260 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 LDLRAD3Q86YD5 345 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 OR5AP2Q8NGF4 316 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 OR13C5Q8NGS8 318 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 OR8U1Q8NH10 309 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 OR1S1Q8NH92 325 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 TSLPQ969D9 159 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 MCHR2Q969V1 340 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 CNIH4Q9P003 139 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 MARCH4Q9P2E8 410 aaPredicted RBP4.66□□□□□ -1.66
SKP1-202ENST00000353411 OR52A1Q9UKL2 312 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 FBXW2Q9UKT8 454 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 SRPK3Q9UPE1 567 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 MED12Q93074 2177 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 MTMR11A4FU01 709 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 GSTZ1O43708 216 aaPredicted RBP4.66□□□□□ -1.66
SKP1-202ENST00000353411 HPNP05981 417 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 EPHA1P21709 976 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 CTSCP53634 463 aa4.66□□□□□ -1.66
SKP1-202ENST00000353411 INPP5JQ15735 1006 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms