RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 A0A1W2PPV9 198 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 OR14I1A6ND48 311 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 D6RAR5 112 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 MT-ATP6P00846 226 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 PPP5CP53041 499 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 MTCP1P56278 107 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 ISL1P61371 349 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 IL11RAQ14626 422 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 ZIC1Q15915 447 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 WIPI1Q5MNZ9 446 aaPredicted RBP12.5□□□□□ -0.41
SMC6-201ENST00000351948 NAXDQ8IW45 347 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 SLC25A43Q8WUT9 341 aaPredicted RBP12.5□□□□□ -0.41
SMC6-201ENST00000351948 KCNIP1Q9NZI2 227 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 NUP50Q9UKX7 468 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 PCM1Q15154 2024 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 FUCA1P04066 466 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 LIPAP38571 399 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 FAPQ12884 760 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 LTC4SQ16873 150 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 SLC36A2Q495M3 483 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 DUSP15Q9H1R2 295 aaPredicted RBP12.5□□□□□ -0.41
SMC6-201ENST00000351948 ZMAT3Q9HA38 289 aaKnown RBP12.5□□□□□ -0.41
SMC6-201ENST00000351948 ACOXLQ9NUZ1 547 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 OSGIN1Q9UJX0 560 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 HIF3AQ9Y2N7 669 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 HRKO00198 91 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 OR7C1O76099 320 aaPredicted RBP12.5□□□□□ -0.41
SMC6-201ENST00000351948 DIRAS3O95661 229 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 RBM39Q14498 530 aaKnown RBP12.5□□□□□ -0.41
SMC6-201ENST00000351948 OR2L13Q8N349 312 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 MINDY2Q8NBR6 621 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 BRIX1Q8TDN6 353 aaKnown RBP12.5□□□□□ -0.41
SMC6-201ENST00000351948 MUL1Q969V5 352 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 MMP28Q9H239 520 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 GABRA2P47869 451 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 MAML2Q8IZL2 1156 aaPredicted RBP12.5□□□□□ -0.41
SMC6-201ENST00000351948 PIGTQ969N2 578 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 NOX4Q9NPH5 578 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 LANCL2Q9NS86 450 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 GPATCH2Q9NW75 528 aa12.5□□□□□ -0.41
SMC6-201ENST00000351948 A6NHS1 94 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 ZNF806P0C7X5 589 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 GSTT2P0CG29 244 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 RBM34P42696 430 aaKnown RBP12.49□□□□□ -0.41
SMC6-201ENST00000351948 CD163Q86VB7 1156 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 TBC1D15Q8TC07 691 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 FGGYQ96C11 551 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 SLC5A6Q9Y289 635 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 KANTRA0A1W2PQU2 76 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 GLCEO94923 617 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 POU3F3P20264 500 aaPredicted RBP12.49□□□□□ -0.41
SMC6-201ENST00000351948 EFNA3P52797 238 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 ZNF181Q2M3W8 571 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 B3GNTL1Q67FW5 361 aaPredicted RBP12.49□□□□□ -0.41
SMC6-201ENST00000351948 RDH10Q8IZV5 341 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 PLPP7Q8NBV4 271 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 OR5L1Q8NGL2 311 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 WDR34Q96EX3 536 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 RNF167Q9H6Y7 350 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 DIMT1Q9UNQ2 313 aaKnown RBP12.49□□□□□ -0.41
SMC6-201ENST00000351948 SATB2Q9UPW6 733 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 LOC285556D6RIA3 1793 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 MKRN2OSH3BPM6 223 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 TIMM8AO60220 97 aaPredicted RBP12.49□□□□□ -0.41
SMC6-201ENST00000351948 PEBP1P30086 187 aaKnown RBP12.49□□□□□ -0.41
SMC6-201ENST00000351948 MRPL19P49406 292 aaKnown RBP12.49□□□□□ -0.41
SMC6-201ENST00000351948 PRICKLE4Q2TBC4 344 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 ELMOD2Q8IZ81 293 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 ABHD4Q8TB40 342 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 FNDC8Q8TC99 324 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 UBE2J1Q9Y385 318 aaPredicted RBP12.49□□□□□ -0.41
SMC6-201ENST00000351948 ZNF814B7Z6K7 855 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 MRPS14O60783 128 aaKnown RBP12.49□□□□□ -0.41
SMC6-201ENST00000351948 WNT1P04628 370 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 ANXA3P12429 323 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 ETV5P41161 510 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 ETV1P50549 477 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 OR1C1Q15619 314 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 ANKRD13BQ86YJ7 626 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 ZNF431Q8TF32 576 aaPredicted RBP12.49□□□□□ -0.41
SMC6-201ENST00000351948 DCLRE1CQ96SD1 692 aaKnown RBP12.49□□□□□ -0.41
SMC6-201ENST00000351948 ZPBPQ9BS86 351 aa12.49□□□□□ -0.41
SMC6-201ENST00000351948 TNFSF14O43557 240 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 AVPR2P30518 371 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 NR4A2P43354 598 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 SELENBP1Q13228 472 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 CDK10Q15131 360 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 CNN3Q15417 329 aaKnown RBP12.48□□□□□ -0.41
SMC6-201ENST00000351948 ZNF628Q5EBL2 1059 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 OVCH1Q7RTY7 1134 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 UBE3DQ7Z6J8 389 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 ANKRD37Q7Z713 158 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 MKXQ8IYA7 352 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 DNAJC5GQ8N7S2 189 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 ASCC1Q8N9N2 400 aaKnown RBP12.48□□□□□ -0.41
SMC6-201ENST00000351948 KCNE4Q8WWG9 221 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 KTI12Q96EK9 354 aaPredicted RBP12.48□□□□□ -0.41
SMC6-201ENST00000351948 MAN2C1Q9NTJ4 1040 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 SBK2P0C263 348 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 TNFSF8P32971 234 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms