RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 PMM1Q92871 262 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 HHIPQ96QV1 700 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 VRK1Q99986 396 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-201ENST00000345512 CGGBP1Q9UFW8 167 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-201ENST00000345512 ING1Q9UK53 422 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-201ENST00000345512 TET1Q8NFU7 2136 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 A0A1W2PPV9 198 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 IDSB3KWA1 339 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 POU3F3P20264 500 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-201ENST00000345512 FBLP22087 321 aaKnown RBP14.22□□□□□ -0.13
PTPRU-201ENST00000345512 OR1D4P47884 311 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 CYCSP99999 105 aaKnown RBP14.22□□□□□ -0.13
PTPRU-201ENST00000345512 SGCAQ16586 387 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 C19orf48Q6RUI8 117 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 RELL2Q8NC24 303 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-201ENST00000345512 OR4K17Q8NGC6 315 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 FOXRED1Q96CU9 486 aaPredicted RBP14.22□□□□□ -0.13
PTPRU-201ENST00000345512 VDAC3Q9Y277 283 aa14.22□□□□□ -0.13
PTPRU-201ENST00000345512 FITM1A5D6W6 292 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 OR2T1O43869 369 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 GALR3O60755 368 aaPredicted RBP14.21□□□□□ -0.13
PTPRU-201ENST00000345512 CTNSO60931 367 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 ACSM1Q08AH1 577 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 ZNF585AQ6P3V2 769 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 FAM71F1Q96KD3 344 aaPredicted RBP14.21□□□□□ -0.13
PTPRU-201ENST00000345512 LOC100289279A0A1B0GTE1 492 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 LINC01553A4QN01 128 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 DVL2O14641 736 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 DNAJB6O75190 326 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 KNG1P01042 644 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 CAMK2BQ13554 666 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 OR5H2Q8NGV7 314 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 OR51Q1Q8NH59 317 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 MIB2Q96AX9 1013 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 AIFM2Q9BRQ8 373 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 APMAPQ9HDC9 416 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 SLC2A4RGQ9NR83 387 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 FBXO9Q9UK97 447 aaPredicted RBP14.21□□□□□ -0.13
PTPRU-201ENST00000345512 SF3B6Q9Y3B4 125 aaKnown RBP14.21□□□□□ -0.13
PTPRU-201ENST00000345512 OR2W5A6NFC9 320 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 PYCARD-AS1I3L0S3 204 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 CCSO14618 274 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 MYOGP15173 224 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 TPMTP51580 245 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 PLA1AQ53H76 456 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 FBXO42Q6P3S6 717 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 ZNF687Q8N1G0 1237 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 OR2AK2Q8NG84 335 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 OR5M1Q8NGP8 315 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 OR1J4Q8NGS1 313 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 POFUT1Q9H488 388 aa14.21□□□□□ -0.13
PTPRU-201ENST00000345512 CACNA1IQ9P0X4 2223 aa14.21□□□□□ -0.14
PTPRU-201ENST00000345512 GMDSO60547 372 aa14.21□□□□□ -0.14
PTPRU-201ENST00000345512 ZFPL1O95159 310 aa14.21□□□□□ -0.14
PTPRU-201ENST00000345512 ADRA2AP08913 450 aa14.21□□□□□ -0.14
PTPRU-201ENST00000345512 ACSM4P0C7M7 580 aa14.21□□□□□ -0.14
PTPRU-201ENST00000345512 RAG2P55895 527 aa14.21□□□□□ -0.14
PTPRU-201ENST00000345512 ZIC1Q15915 447 aa14.21□□□□□ -0.14
PTPRU-201ENST00000345512 PLEKHN1Q494U1 663 aaPredicted RBP14.21□□□□□ -0.14
PTPRU-201ENST00000345512 UNQ6126/PRO20091Q6UXV3 157 aa14.21□□□□□ -0.14
PTPRU-201ENST00000345512 SHISA6Q6ZSJ9 500 aa14.21□□□□□ -0.14
PTPRU-201ENST00000345512 COX15Q7KZN9 410 aa14.21□□□□□ -0.14
PTPRU-201ENST00000345512 VN1R4Q7Z5H5 301 aa14.21□□□□□ -0.14
PTPRU-201ENST00000345512 C19orf47Q8N9M1 422 aaKnown RBP14.21□□□□□ -0.14
PTPRU-201ENST00000345512 SLC37A2Q8TED4 501 aa14.21□□□□□ -0.14
PTPRU-201ENST00000345512 HHIPL1Q96JK4 782 aa14.21□□□□□ -0.14
PTPRU-201ENST00000345512 CNTNAP3BQ96NU0 1288 aa14.21□□□□□ -0.14
PTPRU-201ENST00000345512 EMC9Q9Y3B6 208 aa14.21□□□□□ -0.14
PTPRU-201ENST00000345512 DOCK4Q8N1I0 1966 aa14.21□□□□□ -0.14
PTPRU-201ENST00000345512 OTOFQ9HC10 1997 aa14.21□□□□□ -0.14
PTPRU-201ENST00000345512 A0A0B4J2E0 115 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 A0A1B0GX12 115 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 VSTM2BA6NLU5 285 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 PMS2P2O95744 297 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 HPXP02790 462 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 TPT1P13693 172 aaKnown RBP14.2□□□□□ -0.14
PTPRU-201ENST00000345512 PPP2CBP62714 309 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 PPP2CAP67775 309 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 ZNF85Q03923 595 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 MESP2Q0VG99 397 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 OR7A5Q15622 319 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 PRSS41Q7RTY9 318 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 TRAPPC6BQ86SZ2 158 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 NPRL2Q8WTW4 380 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 SLC17A4Q9Y2C5 497 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 BHLHE40O14503 412 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 CTSVO60911 334 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 UTS2O95399 124 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 CD3DP04234 171 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 APEHP13798 732 aaKnown RBP14.2□□□□□ -0.14
PTPRU-201ENST00000345512 DMKNQ6E0U4 476 aaPredicted RBP14.2□□□□□ -0.14
PTPRU-201ENST00000345512 MRM1Q6IN84 353 aaKnown RBP14.2□□□□□ -0.14
PTPRU-201ENST00000345512 OR4C16Q8NGL9 310 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 CD300LFQ8TDQ1 290 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 SENP5Q96HI0 755 aaPredicted RBP14.2□□□□□ -0.14
PTPRU-201ENST00000345512 LRFN5Q96NI6 719 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 NRSN2Q9GZP1 204 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 SNRPGP15A8MWD9 76 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 PRAMEF26H0Y7S4 382 aa14.2□□□□□ -0.14
PTPRU-201ENST00000345512 GLDNQ6ZMI3 551 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms