RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 KLF13Q9Y2Y9 288 aaPredicted RBP13.19□□□□□ -0.3
CXCL12-201ENST00000343575 LIPT2A6NK58 231 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 BLOC1S5-TXNDC5H3BN57 136 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 K7EM74 188 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 K7ENP7 123 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 SURF4O15260 269 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 RGS5O15539 181 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 GPX5O75715 221 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 NDUFB2O95178 105 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 MT-ATP6P00846 226 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 IL1AP01583 271 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 BMP7P18075 431 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 MYL9P24844 172 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 GRPRP30550 384 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 MEOX1P50221 254 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 RPL18Q07020 188 aaKnown RBP13.19□□□□□ -0.3
CXCL12-201ENST00000343575 DBPQ10586 325 aaPredicted RBP13.19□□□□□ -0.3
CXCL12-201ENST00000343575 MYBPHQ13203 477 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 HYAL4Q2M3T9 481 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 GLYR1Q49A26 553 aaPredicted RBP13.19□□□□□ -0.3
CXCL12-201ENST00000343575 RNFT1Q5M7Z0 435 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 WIPI1Q5MNZ9 446 aaPredicted RBP13.19□□□□□ -0.3
CXCL12-201ENST00000343575 SLC35F1Q5T1Q4 408 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 RAET1LQ5VY80 246 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 INO80CQ6PI98 192 aaPredicted RBP13.19□□□□□ -0.3
CXCL12-201ENST00000343575 MFSD8Q8NHS3 518 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 MARVELD3Q96A59 401 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 DDIT4LQ96D03 193 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 RNF121Q9H920 327 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 AMBNQ9NP70 447 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 NRIP3Q9NQ35 241 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 SSR3Q9UNL2 185 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 GPR52Q9Y2T5 361 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 RAXQ9Y2V3 346 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 ADAM18Q9Y3Q7 739 aa13.19□□□□□ -0.3
CXCL12-201ENST00000343575 ANKRD11Q6UB99 2663 aaPredicted RBP13.18□□□□□ -0.3
CXCL12-201ENST00000343575 A0A1W2PNR3 127 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 A0A1W2PQ09 198 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 TLX2O43763 284 aaPredicted RBP13.18□□□□□ -0.3
CXCL12-201ENST00000343575 OR2T1O43869 369 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 SSX4O60224 188 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 TMCC2O75069 709 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 AHSA1O95433 338 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 PPP1R3DO95685 299 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 CD46P15529 392 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 ZNF17P17021 662 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 PTBP1P26599 531 aaKnown RBP eCLIP13.18□□□□□ -0.3
CXCL12-201ENST00000343575 GDF1P27539 372 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 NUDT6P53370 316 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 GFRA1P56159 465 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 FOXK2Q01167 660 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 TNK1Q13470 666 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 SNAPC1Q16533 368 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 TMEM176BQ3YBM2 270 aaPredicted RBP13.18□□□□□ -0.3
CXCL12-201ENST00000343575 SOWAHCQ53LP3 525 aaPredicted RBP13.18□□□□□ -0.3
CXCL12-201ENST00000343575 CASP12Q6UXS9 341 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 PTCHD4Q6ZW05 846 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.18□□□□□ -0.3
CXCL12-201ENST00000343575 FAM26EQ8N5C1 309 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 TMEM251Q8N6I4 163 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 OR52L1Q8NGH7 329 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 OR8J1Q8NGP2 316 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 OPALINQ96PE5 141 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 NEDD4LQ96PU5 975 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 GPX7Q96SL4 187 aaPredicted RBP13.18□□□□□ -0.3
CXCL12-201ENST00000343575 IFT27Q9BW83 186 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 MND1Q9BWT6 205 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 SERINC1Q9NRX5 453 aa13.18□□□□□ -0.3
CXCL12-201ENST00000343575 ZNF407Q9C0G0 2248 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 C1QTNF9BB2RNN3 333 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 H0YC42 278 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 HPNP05981 417 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 C1QTNF9P0C862 333 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 TFPIP10646 304 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 SFTPDP35247 375 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 RPS19P39019 145 aaKnown RBP13.17□□□□□ -0.3
CXCL12-201ENST00000343575 MAGEA5P43359 124 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 PRPS1P60891 318 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 C1DQ13901 141 aaKnown RBP13.17□□□□□ -0.3
CXCL12-201ENST00000343575 TOMM20Q15388 145 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 OR7A5Q15622 319 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 SSX1Q16384 188 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 SGCBQ16585 318 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 TMEM201Q5SNT2 666 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 SLC25A30Q5SVS4 291 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 IGFL3Q6UXB1 125 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 CREB3L2Q70SY1 520 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 MAMDC2Q7Z304 686 aaPredicted RBP13.17□□□□□ -0.3
CXCL12-201ENST00000343575 FAM122BQ7Z309 247 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 OR5J2Q8NH18 312 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 ZNF417Q8TAU3 575 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 AP3S1Q92572 193 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 ZC3HAV1LQ96H79 300 aaKnown RBP13.17□□□□□ -0.3
CXCL12-201ENST00000343575 DMRTB1Q96MA1 342 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 C5orf34Q96MH7 638 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 ZNF587Q96SQ5 575 aaPredicted RBP13.17□□□□□ -0.3
CXCL12-201ENST00000343575 PIGQQ9BRB3 760 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 TTYH2Q9BSA4 534 aa13.17□□□□□ -0.3
CXCL12-201ENST00000343575 PCDHGA9Q9Y5G4 932 aaKnown RBP13.17□□□□□ -0.3
CXCL12-201ENST00000343575 FAM166BA8MTA8 275 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms