RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 H0YC42 278 aa15.52■□□□□ 0.07
CLDN4-201ENST00000340958 GLSO94925 669 aaPredicted RBP15.52■□□□□ 0.07
CLDN4-201ENST00000340958 PYCR1P32322 319 aa15.52■□□□□ 0.07
CLDN4-201ENST00000340958 SH3BGRP55822 239 aaPredicted RBP15.52■□□□□ 0.07
CLDN4-201ENST00000340958 BIDP55957 195 aa15.52■□□□□ 0.07
CLDN4-201ENST00000340958 GFRA1P56159 465 aa15.52■□□□□ 0.07
CLDN4-201ENST00000340958 SRYQ05066 204 aa15.52■□□□□ 0.07
CLDN4-201ENST00000340958 SYT6Q5T7P8 510 aaPredicted RBP15.52■□□□□ 0.07
CLDN4-201ENST00000340958 OR2V1Q8NHB1 315 aa15.52■□□□□ 0.07
CLDN4-201ENST00000340958 ZNF519Q8TB69 540 aa15.52■□□□□ 0.07
CLDN4-201ENST00000340958 KISS1RQ969F8 398 aaPredicted RBP15.52■□□□□ 0.07
CLDN4-201ENST00000340958 SMAD5Q99717 465 aaKnown RBP15.52■□□□□ 0.07
CLDN4-201ENST00000340958 ALG12Q9BV10 488 aa15.52■□□□□ 0.07
CLDN4-201ENST00000340958 SLC6A15Q9H2J7 730 aa15.52■□□□□ 0.07
CLDN4-201ENST00000340958 KLHL13Q9P2N7 655 aa15.52■□□□□ 0.07
CLDN4-201ENST00000340958 RSL24D1Q9UHA3 163 aaKnown RBP15.52■□□□□ 0.07
CLDN4-201ENST00000340958 MOKQ9UQ07 419 aa15.52■□□□□ 0.07
CLDN4-201ENST00000340958 PCDHGB7Q9Y5F8 929 aa15.52■□□□□ 0.07
CLDN4-201ENST00000340958 CEPT1Q9Y6K0 416 aa15.52■□□□□ 0.07
CLDN4-201ENST00000340958 PIEZO2Q9H5I5 2752 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 NPIPA2E9PIF3 369 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 NPIPA3F8WFD2 350 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 TRMUO75648 421 aaKnown RBP15.51■□□□□ 0.07
CLDN4-201ENST00000340958 GLCEO94923 617 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 HLA-DQA2P01906 255 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 ENPP1P22413 925 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 RAC3P60763 192 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 HYAL4Q2M3T9 481 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 EEF1A1P5Q5VTE0 462 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 RNLSQ5VYX0 342 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 BORAQ6PGQ7 559 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 HDDC2Q7Z4H3 204 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 ACBD7Q8N6N7 88 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 NANOGP1Q8N7R0 232 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 POMGNT2Q8NAT1 580 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 SYT14Q8NB59 555 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 ASB10Q8WXI3 467 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 TXNDC15Q96J42 360 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 DDOQ99489 341 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 NMNAT2Q9BZQ4 307 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 DEFB127Q9H1M4 99 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 QPCTLQ9NXS2 382 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 HAO2Q9NYQ3 351 aa15.51■□□□□ 0.07
CLDN4-201ENST00000340958 ZNF726A6NNF4 738 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 C12orf71A8MTZ7 269 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 TFECO14948 347 aaPredicted RBP15.5■□□□□ 0.07
CLDN4-201ENST00000340958 SLC16A7O60669 478 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 VAMP5O95183 116 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 SBK2P0C263 348 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 NAA10P41227 235 aaPredicted RBP15.5■□□□□ 0.07
CLDN4-201ENST00000340958 SPHARQ15513 63 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 ARMCX4Q5H9R4 360 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 B3GNT6Q6ZMB0 384 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 OR6V1Q8N148 313 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 KLHL36Q8N4N3 616 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 MEIOBQ8N635 442 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 OR10D3Q8NH80 312 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 OR5M11Q96RB7 305 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 EMC6Q9BV81 110 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 NUAK2Q9H093 628 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 ADGRL4Q9HBW9 690 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 FANCFQ9NPI8 374 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 B3GAT1Q9P2W7 334 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 BOD1L1Q8NFC6 3051 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 NPIPB13A6NJU9 1138 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 ZNF814B7Z6K7 855 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 NPIPB4C9JG80 1138 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 DNPH1O43598 174 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 CXCL13O43927 109 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 SUCLG1P53597 346 aaKnown RBP15.5■□□□□ 0.07
CLDN4-201ENST00000340958 CLRN1P58418 232 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 ACTC1P68032 377 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 ACTA1P68133 377 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 DNM1P34Q6PK57 102 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 TMPRSS11AQ6ZMR5 421 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 GGNQ86UU5 652 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 GATAD2BQ8WXI9 593 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 ABTB1Q969K4 478 aaPredicted RBP15.5■□□□□ 0.07
CLDN4-201ENST00000340958 COG8Q96MW5 612 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 UCN2Q96RP3 112 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 MGLLQ99685 303 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 SRXN1Q9BYN0 137 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 ERVK13-1Q9NX77 482 aa15.5■□□□□ 0.07
CLDN4-201ENST00000340958 ATRXP46100 2492 aa15.49■□□□□ 0.07
CLDN4-201ENST00000340958 SLC22A23A1A5C7 686 aa15.49■□□□□ 0.07
CLDN4-201ENST00000340958 FZD7O75084 574 aa15.49■□□□□ 0.07
CLDN4-201ENST00000340958 ZNF24P17028 368 aa15.49■□□□□ 0.07
CLDN4-201ENST00000340958 CRABP1P29762 137 aa15.49■□□□□ 0.07
CLDN4-201ENST00000340958 CD97P48960 835 aa15.49■□□□□ 0.07
CLDN4-201ENST00000340958 P2RY4P51582 365 aa15.49■□□□□ 0.07
CLDN4-201ENST00000340958 WNT4P56705 351 aa15.49■□□□□ 0.07
CLDN4-201ENST00000340958 PMP22Q01453 160 aa15.49■□□□□ 0.07
CLDN4-201ENST00000340958 RUNX1T1Q06455 604 aa15.49■□□□□ 0.07
CLDN4-201ENST00000340958 CARD17Q5XLA6 110 aa15.49■□□□□ 0.07
CLDN4-201ENST00000340958 SMAP2Q8WU79 429 aaPredicted RBP15.49■□□□□ 0.07
CLDN4-201ENST00000340958 RBP7Q96R05 134 aa15.49■□□□□ 0.07
CLDN4-201ENST00000340958 SNX18Q96RF0 628 aa15.49■□□□□ 0.07
CLDN4-201ENST00000340958 FUNDC2Q9BWH2 189 aa15.49■□□□□ 0.07
CLDN4-201ENST00000340958 RBM38Q9H0Z9 239 aaKnown RBP15.49■□□□□ 0.07
CLDN4-201ENST00000340958 ACKR4Q9NPB9 350 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms