RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 TMEM129A0AVI4 362 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 CTNSO60931 367 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 RP2O75695 350 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 H2AFB2P0C5Z0 115 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 KHKP50053 298 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 DEFA6Q01524 100 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 CLINT1Q14677 625 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 GSG1Q2KHT4 349 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 TMEM64Q6YI46 380 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 Q6ZTK2 550 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 ZAR1Q86SH2 424 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 NR2C2APQ86WQ0 139 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 UXS1Q8NBZ7 420 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 ZNF354BQ96LW1 612 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 C7orf50Q9BRJ6 194 aaKnown RBP13.74□□□□□ -0.21
BRAT1-201ENST00000340611 CHRNA10Q9GZZ6 450 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 CHST2Q9Y4C5 530 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 LAMA5O15230 3695 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 ZFHX4Q86UP3 3567 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 CLDN4O14493 209 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 PRODHO43272 600 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 NFYAP23511 347 aaPredicted RBP13.74□□□□□ -0.21
BRAT1-201ENST00000340611 SLC1A3P43003 542 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 GCGRP47871 477 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 HSD17B7P56937 341 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 RAB40BQ12829 278 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 MZT2AQ6P582 158 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 METAP1DQ6UB28 335 aaPredicted RBP13.74□□□□□ -0.21
BRAT1-201ENST00000340611 DBX2Q6ZNG2 339 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 SSX9Q7RTT3 188 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 VRK2Q86Y07 508 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 PRSS33Q8NF86 280 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 DGAT2Q96PD7 388 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 LMF1Q96S06 567 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 SPOCK3Q9BQ16 436 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 A4GALTQ9NPC4 353 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 SEMA4GQ9NTN9 838 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 P2RX2Q9UBL9 471 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 RARRES3Q9UL19 164 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 MRPS33Q9Y291 106 aaKnown RBP13.74□□□□□ -0.21
BRAT1-201ENST00000340611 PCDHGA5Q9Y5G8 931 aa13.74□□□□□ -0.21
BRAT1-201ENST00000340611 H0YIG0 161 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 NTN3O00634 580 aaPredicted RBP13.73□□□□□ -0.21
BRAT1-201ENST00000340611 SLC35E2P0CK97 266 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 PTNP21246 168 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 S1PR1P21453 382 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 PAICSP22234 425 aaKnown RBP13.73□□□□□ -0.21
BRAT1-201ENST00000340611 STARP49675 285 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 SMCO1Q147U7 214 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 OR5M10Q6IEU7 315 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 CD200R1LQ6Q8B3 271 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 COX15Q7KZN9 410 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 MS4A4EQ96PG1 132 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 FUZQ9BT04 418 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 ACTRT3Q9BYD9 372 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 UFSP2Q9NUQ7 469 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 SIDT1Q9NXL6 827 aaKnown RBP13.73□□□□□ -0.21
BRAT1-201ENST00000340611 CNIH4Q9P003 139 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 NTMQ9P121 344 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 MGAT4CQ9UBM8 478 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 IL20RAQ9UHF4 553 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 FXYD6-FXYD2A0A087WZ82 144 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 E9PI62 339 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 PRF1P14222 555 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 POU3F4P49335 361 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 CDK5Q00535 292 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 ZNF155Q12901 538 aaPredicted RBP13.73□□□□□ -0.21
BRAT1-201ENST00000340611 AVPI1Q5T686 147 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 SFRP4Q6FHJ7 346 aaPredicted RBP13.73□□□□□ -0.21
BRAT1-201ENST00000340611 KMT5CQ86Y97 462 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 KLBQ86Z14 1044 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 ZNF595Q8IYB9 648 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 ARIH2OSQ8N7S6 290 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 SFXN5Q8TD22 340 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 RXFP4Q8TDU9 374 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 FGF11Q92914 225 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 ZFP3Q96NJ6 502 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 OR8D2Q9GZM6 311 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 FXYD6Q9H0Q3 95 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 FGF20Q9NP95 211 aaPredicted RBP13.73□□□□□ -0.21
BRAT1-201ENST00000340611 MAN2C1Q9NTJ4 1040 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 MBD2Q9UBB5 411 aa13.73□□□□□ -0.21
BRAT1-201ENST00000340611 C19orf53Q9UNZ5 99 aaPredicted RBP13.73□□□□□ -0.21
BRAT1-201ENST00000340611 FAM186AA6NE01 2351 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 C4BPBP20851 252 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 GABRA3P34903 492 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 DUSP3P51452 185 aaPredicted RBP13.72□□□□□ -0.21
BRAT1-201ENST00000340611 NUBP1P53384 320 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 SKP1P63208 163 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 NSDHLQ15738 373 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 NAXDQ8IW45 347 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 OR6T1Q8NGN1 323 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 OR10K1Q8NGX5 313 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 THAP6Q8TBB0 222 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 SPRYD4Q8WW59 207 aaPredicted RBP13.72□□□□□ -0.21
BRAT1-201ENST00000340611 LOXL4Q96JB6 756 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 NRSN2Q9GZP1 204 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.72□□□□□ -0.21
BRAT1-201ENST00000340611 C17orf105B2RV13 164 aa13.72□□□□□ -0.21
BRAT1-201ENST00000340611 SULT1C2O00338 296 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms