RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 BDH2Q9BUT1 245 aa12.71□□□□□ -0.37
ERCC1-203ENST00000340192 TAGLN3Q9UI15 199 aa12.71□□□□□ -0.37
ERCC1-203ENST00000340192 RPS6KA6Q9UK32 745 aa12.71□□□□□ -0.37
ERCC1-203ENST00000340192 ZFHX3Q15911 3703 aa12.71□□□□□ -0.38
ERCC1-203ENST00000340192 SETD2Q9BYW2 2564 aaPredicted RBP12.71□□□□□ -0.38
ERCC1-203ENST00000340192 NIPBLQ6KC79 2804 aaeCLIP12.7□□□□□ -0.38
ERCC1-203ENST00000340192 ZANQ9Y493 2812 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 NDUFS7O75251 213 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 PRSS23O95084 383 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 IGHV4-39P01824 125 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 HLA-HP01893 362 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 PGA4P0DJD7 388 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 PGA3P0DJD8 388 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 IFI30P13284 250 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 CALCRP30988 508 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 APOBEC3AP31941 199 aaPredicted RBP12.7□□□□□ -0.38
ERCC1-203ENST00000340192 ARR3P36575 388 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 IDH3GP51553 393 aaPredicted RBP12.7□□□□□ -0.38
ERCC1-203ENST00000340192 NAAAQ02083 359 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 NPRL3Q12980 569 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 LAPTM4AQ15012 233 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 TRAM2Q15035 370 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 LRFN4Q6PJG9 635 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 TSEN54Q7Z6J9 526 aaKnown RBP12.7□□□□□ -0.38
ERCC1-203ENST00000340192 BIVMQ86UB2 503 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 MEX3DQ86XN8 651 aaKnown RBP12.7□□□□□ -0.38
ERCC1-203ENST00000340192 ANKS4BQ8N8V4 417 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 COX4I2Q96KJ9 171 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 FOXB1Q99853 325 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 CACNG6Q9BXT2 260 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 INIPQ9NRY2 104 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 DCAF13Q9NV06 445 aaKnown RBP12.7□□□□□ -0.38
ERCC1-203ENST00000340192 B3GNT2Q9NY97 397 aa12.7□□□□□ -0.38
ERCC1-203ENST00000340192 GDF2Q9UK05 429 aaPredicted RBP12.7□□□□□ -0.38
ERCC1-203ENST00000340192 HTR3EA5X5Y0 456 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 MCIDASD6RGH6 385 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 SMAD7O15105 426 aaKnown RBP12.69□□□□□ -0.38
ERCC1-203ENST00000340192 GMNNO75496 209 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 IGHG1P01857 330 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 CD79AP11912 226 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 TCN1P20061 433 aaPredicted RBP12.69□□□□□ -0.38
ERCC1-203ENST00000340192 MAKP20794 623 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 ACVR1BP36896 505 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 DAP3P51398 398 aaKnown RBP12.69□□□□□ -0.38
ERCC1-203ENST00000340192 RIPPLY3P57055 190 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 CLRN1P58418 232 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 PRKCDQ05655 676 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 RUNX1T1Q06455 604 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 ETFDHQ16134 617 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 CLEC12BQ2HXU8 276 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 GSG1Q2KHT4 349 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 ZNF730Q6ZMV8 503 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 CYP4Z1Q86W10 505 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 NRMQ8IXM6 262 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 PGAM4Q8N0Y7 254 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 FAM86B1Q8N7N1 296 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 ASB10Q8WXI3 467 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 ACOT11Q8WXI4 607 aaPredicted RBP12.69□□□□□ -0.38
ERCC1-203ENST00000340192 CCT8L2Q96SF2 557 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 NOX3Q9HBY0 568 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 CA10Q9NS85 328 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 ZNF224Q9NZL3 707 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 SAMD4AQ9UPU9 718 aaKnown RBP12.69□□□□□ -0.38
ERCC1-203ENST00000340192 HIF3AQ9Y2N7 669 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 ENPP4Q9Y6X5 453 aa12.69□□□□□ -0.38
ERCC1-203ENST00000340192 A0A087WUU8 490 aa12.68□□□□□ -0.38
ERCC1-203ENST00000340192 QDPRP09417 244 aa12.68□□□□□ -0.38
ERCC1-203ENST00000340192 SAGP10523 405 aaPredicted RBP12.68□□□□□ -0.38
ERCC1-203ENST00000340192 HSD17B1P14061 328 aa12.68□□□□□ -0.38
ERCC1-203ENST00000340192 MSX2P35548 267 aaPredicted RBP12.68□□□□□ -0.38
ERCC1-203ENST00000340192 PIGFQ07326 219 aa12.68□□□□□ -0.38
ERCC1-203ENST00000340192 TNK1Q13470 666 aa12.68□□□□□ -0.38
ERCC1-203ENST00000340192 HIST3H3Q16695 136 aa12.68□□□□□ -0.38
ERCC1-203ENST00000340192 ALG10Q5BKT4 473 aa12.68□□□□□ -0.38
ERCC1-203ENST00000340192 SAMD4BQ5PRF9 694 aaKnown RBP12.68□□□□□ -0.38
ERCC1-203ENST00000340192 TBPL2Q6SJ96 375 aa12.68□□□□□ -0.38
ERCC1-203ENST00000340192 PIWIL3Q7Z3Z3 882 aaKnown RBP12.68□□□□□ -0.38
ERCC1-203ENST00000340192 HDDC2Q7Z4H3 204 aa12.68□□□□□ -0.38
ERCC1-203ENST00000340192 RNF113BQ8IZP6 322 aaKnown RBP12.68□□□□□ -0.38
ERCC1-203ENST00000340192 SLC22A24Q8N4F4 322 aa12.68□□□□□ -0.38
ERCC1-203ENST00000340192 SYT14Q8NB59 555 aa12.68□□□□□ -0.38
ERCC1-203ENST00000340192 NOXO1Q8NFA2 376 aa12.68□□□□□ -0.38
ERCC1-203ENST00000340192 NANOS1Q8WY41 292 aaKnown RBP12.68□□□□□ -0.38
ERCC1-203ENST00000340192 ZNF347Q96SE7 839 aa12.68□□□□□ -0.38
ERCC1-203ENST00000340192 CDRT15Q96T59 188 aa12.68□□□□□ -0.38
ERCC1-203ENST00000340192 SEPHS2Q99611 448 aa12.68□□□□□ -0.38
ERCC1-203ENST00000340192 MRPL13Q9BYD1 178 aaKnown RBP12.68□□□□□ -0.38
ERCC1-203ENST00000340192 GORASP2Q9H8Y8 452 aa12.68□□□□□ -0.38
ERCC1-203ENST00000340192 NMNAT1Q9HAN9 279 aaPredicted RBP12.68□□□□□ -0.38
ERCC1-203ENST00000340192 BARX1Q9HBU1 254 aaPredicted RBP12.68□□□□□ -0.38
ERCC1-203ENST00000340192 NDUFAF4Q9P032 175 aa12.68□□□□□ -0.38
ERCC1-203ENST00000340192 CD300AQ9UGN4 299 aa12.68□□□□□ -0.38
ERCC1-203ENST00000340192 TRAV27A0A087WT01 109 aa12.67□□□□□ -0.38
ERCC1-203ENST00000340192 IGHV2OR16-5A0A0B4J2B6 119 aa12.67□□□□□ -0.38
ERCC1-203ENST00000340192 NPIPB13A6NJU9 1138 aa12.67□□□□□ -0.38
ERCC1-203ENST00000340192 EFCAB9A8MZ26 197 aa12.67□□□□□ -0.38
ERCC1-203ENST00000340192 NPIPB4C9JG80 1138 aa12.67□□□□□ -0.38
ERCC1-203ENST00000340192 H7C417 338 aa12.67□□□□□ -0.38
ERCC1-203ENST00000340192 hCG_2039718K7EN88 272 aa12.67□□□□□ -0.38
ERCC1-203ENST00000340192 DHHO43323 396 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms