RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 LSP1P33241 339 aa16.78■□□□□ 0.28
ITGA4-202ENST00000339307 SRSF2Q01130 221 aaKnown RBP16.78■□□□□ 0.28
ITGA4-202ENST00000339307 RBBP4Q09028 425 aa16.78■□□□□ 0.28
ITGA4-202ENST00000339307 SLC35D2Q76EJ3 337 aa16.78■□□□□ 0.28
ITGA4-202ENST00000339307 HIST3H2AQ7L7L0 130 aa16.78■□□□□ 0.28
ITGA4-202ENST00000339307 RBM45Q8IUH3 476 aaKnown RBP16.78■□□□□ 0.28
ITGA4-202ENST00000339307 HIST1H2ACQ93077 130 aa16.78■□□□□ 0.28
ITGA4-202ENST00000339307 CGREF1Q99674 301 aa16.78■□□□□ 0.28
ITGA4-202ENST00000339307 ARHGDIGQ99819 225 aa16.78■□□□□ 0.28
ITGA4-202ENST00000339307 SOX7Q9BT81 388 aa16.78■□□□□ 0.28
ITGA4-202ENST00000339307 MRPL37Q9BZE1 423 aaKnown RBP16.78■□□□□ 0.28
ITGA4-202ENST00000339307 NANSQ9NR45 359 aa16.78■□□□□ 0.28
ITGA4-202ENST00000339307 REV1Q9UBZ9 1251 aa16.78■□□□□ 0.28
ITGA4-202ENST00000339307 SLC7A7Q9UM01 511 aa16.78■□□□□ 0.28
ITGA4-202ENST00000339307 FZR1Q9UM11 496 aa16.78■□□□□ 0.28
ITGA4-202ENST00000339307 MALRD1Q5VYJ5 2156 aa16.77■□□□□ 0.27
ITGA4-202ENST00000339307 UBL3O95164 117 aa16.77■□□□□ 0.27
ITGA4-202ENST00000339307 MELKQ14680 651 aa16.77■□□□□ 0.27
ITGA4-202ENST00000339307 RAB39AQ14964 217 aa16.77■□□□□ 0.27
ITGA4-202ENST00000339307 ZNF786Q8N393 782 aa16.77■□□□□ 0.27
ITGA4-202ENST00000339307 ADAMTS16Q8TE57 1224 aa16.77■□□□□ 0.27
ITGA4-202ENST00000339307 NPHS2Q9NP85 383 aa16.77■□□□□ 0.27
ITGA4-202ENST00000339307 FAM53CQ9NYF3 392 aa16.77■□□□□ 0.27
ITGA4-202ENST00000339307 M0R233 179 aa16.76■□□□□ 0.27
ITGA4-202ENST00000339307 FMO6PO60774 539 aa16.76■□□□□ 0.27
ITGA4-202ENST00000339307 C8BP07358 591 aa16.76■□□□□ 0.27
ITGA4-202ENST00000339307 ZNF14P17017 642 aaPredicted RBP16.76■□□□□ 0.27
ITGA4-202ENST00000339307 CD247P20963 164 aa16.76■□□□□ 0.27
ITGA4-202ENST00000339307 ALDH3B1P43353 468 aa16.76■□□□□ 0.27
ITGA4-202ENST00000339307 PCBP3P57721 371 aaKnown RBP16.76■□□□□ 0.27
ITGA4-202ENST00000339307 CCNIQ14094 377 aa16.76■□□□□ 0.27
ITGA4-202ENST00000339307 NPTX1Q15818 432 aa16.76■□□□□ 0.27
ITGA4-202ENST00000339307 CR1LQ2VPA4 569 aa16.76■□□□□ 0.27
ITGA4-202ENST00000339307 PATL1Q86TB9 770 aaKnown RBP16.76■□□□□ 0.27
ITGA4-202ENST00000339307 RETREG3Q86VR2 466 aa16.76■□□□□ 0.27
ITGA4-202ENST00000339307 LRRC17Q8N6Y2 441 aa16.76■□□□□ 0.27
ITGA4-202ENST00000339307 GPR32P1Q8NGA4 272 aa16.76■□□□□ 0.27
ITGA4-202ENST00000339307 OR10A6Q8NH74 314 aa16.76■□□□□ 0.27
ITGA4-202ENST00000339307 ZNF566Q969W8 418 aa16.76■□□□□ 0.27
ITGA4-202ENST00000339307 MRPL24Q96A35 216 aaKnown RBP16.76■□□□□ 0.27
ITGA4-202ENST00000339307 RNF121Q9H920 327 aa16.76■□□□□ 0.27
ITGA4-202ENST00000339307 GLTPQ9NZD2 209 aa16.76■□□□□ 0.27
ITGA4-202ENST00000339307 DUSP13Q9UII6 198 aa16.76■□□□□ 0.27
ITGA4-202ENST00000339307 A0A0G2JND7 137 aa16.75■□□□□ 0.27
ITGA4-202ENST00000339307 SYNGR3O43761 229 aa16.75■□□□□ 0.27
ITGA4-202ENST00000339307 TROVE2P10155 538 aaKnown RBP eCLIP16.75■□□□□ 0.27
ITGA4-202ENST00000339307 ZNF35P13682 527 aa16.75■□□□□ 0.27
ITGA4-202ENST00000339307 GIFP27352 417 aa16.75■□□□□ 0.27
ITGA4-202ENST00000339307 IL2RGP31785 369 aa16.75■□□□□ 0.27
ITGA4-202ENST00000339307 TRIP10Q15642 601 aa16.75■□□□□ 0.27
ITGA4-202ENST00000339307 ZNF74Q16587 644 aa16.75■□□□□ 0.27
ITGA4-202ENST00000339307 LINC00114Q6XXX2 140 aa16.75■□□□□ 0.27
ITGA4-202ENST00000339307 WDR88Q6ZMY6 472 aa16.75■□□□□ 0.27
ITGA4-202ENST00000339307 SLC30A8Q8IWU4 369 aa16.75■□□□□ 0.27
ITGA4-202ENST00000339307 SKA3Q8IX90 412 aa16.75■□□□□ 0.27
ITGA4-202ENST00000339307 OR4D11Q8NGI4 311 aa16.75■□□□□ 0.27
ITGA4-202ENST00000339307 MXRA5Q9NR99 2828 aa16.75■□□□□ 0.27
ITGA4-202ENST00000339307 A0A1W2PPW3 197 aa16.74■□□□□ 0.27
ITGA4-202ENST00000339307 TRAPPC13A5PLN9 417 aa16.74■□□□□ 0.27
ITGA4-202ENST00000339307 BLOC1S5-TXNDC5H3BN57 136 aa16.74■□□□□ 0.27
ITGA4-202ENST00000339307 VIMP08670 466 aaKnown RBP16.74■□□□□ 0.27
ITGA4-202ENST00000339307 GLRXP35754 106 aa16.74■□□□□ 0.27
ITGA4-202ENST00000339307 RPS23P62266 143 aaKnown RBP16.74■□□□□ 0.27
ITGA4-202ENST00000339307 MAD2L1BPQ15013 274 aaPredicted RBP16.74■□□□□ 0.27
ITGA4-202ENST00000339307 KRTAP24-1Q3LI83 254 aa16.74■□□□□ 0.27
ITGA4-202ENST00000339307 INTS11Q5TA45 600 aaKnown RBP16.74■□□□□ 0.27
ITGA4-202ENST00000339307 NHLRC1Q6VVB1 395 aa16.74■□□□□ 0.27
ITGA4-202ENST00000339307 ZNF627Q7L945 461 aa16.74■□□□□ 0.27
ITGA4-202ENST00000339307 PIWIL3Q7Z3Z3 882 aaKnown RBP16.74■□□□□ 0.27
ITGA4-202ENST00000339307 DPP10Q8N608 796 aa16.74■□□□□ 0.27
ITGA4-202ENST00000339307 LINC01356Q8N9X3 169 aa16.74■□□□□ 0.27
ITGA4-202ENST00000339307 OR6X1Q8NH79 312 aa16.74■□□□□ 0.27
ITGA4-202ENST00000339307 TMEM54Q969K7 222 aa16.74■□□□□ 0.27
ITGA4-202ENST00000339307 SH3GL3Q99963 347 aa16.74■□□□□ 0.27
ITGA4-202ENST00000339307 OR51B6Q9H340 312 aa16.74■□□□□ 0.27
ITGA4-202ENST00000339307 MS4A5Q9H3V2 200 aa16.74■□□□□ 0.27
ITGA4-202ENST00000339307 DENND2DQ9H6A0 471 aaPredicted RBP16.74■□□□□ 0.27
ITGA4-202ENST00000339307 NARFLQ9H6Q4 476 aa16.74■□□□□ 0.27
ITGA4-202ENST00000339307 KAT8Q9H7Z6 458 aaKnown RBP16.74■□□□□ 0.27
ITGA4-202ENST00000339307 TAS2R5Q9NYW4 299 aa16.74■□□□□ 0.27
ITGA4-202ENST00000339307 ZNF224Q9NZL3 707 aa16.74■□□□□ 0.27
ITGA4-202ENST00000339307 FBXL3Q9UKT7 428 aa16.74■□□□□ 0.27
ITGA4-202ENST00000339307 LILRA1O75019 489 aa16.73■□□□□ 0.27
ITGA4-202ENST00000339307 FARS2O95363 451 aaKnown RBP16.73■□□□□ 0.27
ITGA4-202ENST00000339307 BCL10O95999 233 aa16.73■□□□□ 0.27
ITGA4-202ENST00000339307 THY1P04216 161 aa16.73■□□□□ 0.27
ITGA4-202ENST00000339307 OR8G3PP0DMU2 310 aa16.73■□□□□ 0.27
ITGA4-202ENST00000339307 SRP14P37108 136 aaKnown RBP16.73■□□□□ 0.27
ITGA4-202ENST00000339307 SEC24CP53992 1094 aa16.73■□□□□ 0.27
ITGA4-202ENST00000339307 CLRN1P58418 232 aa16.73■□□□□ 0.27
ITGA4-202ENST00000339307 MSMPQ1L6U9 139 aa16.73■□□□□ 0.27
ITGA4-202ENST00000339307 ALKBH6Q3KRA9 238 aa16.73■□□□□ 0.27
ITGA4-202ENST00000339307 NANOGNBQ7Z5D8 188 aa16.73■□□□□ 0.27
ITGA4-202ENST00000339307 LRP11Q86VZ4 500 aa16.73■□□□□ 0.27
ITGA4-202ENST00000339307 SLC22A24Q8N4F4 322 aa16.73■□□□□ 0.27
ITGA4-202ENST00000339307 FGFBP3Q8TAT2 258 aa16.73■□□□□ 0.27
ITGA4-202ENST00000339307 TAMM41Q96BW9 452 aa16.73■□□□□ 0.27
ITGA4-202ENST00000339307 ZNF75AQ96N20 296 aa16.73■□□□□ 0.27
ITGA4-202ENST00000339307 MCIDASD6RGH6 385 aa16.72■□□□□ 0.27
ITGA4-202ENST00000339307 ENTPD5O75356 428 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms