RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 CRHBPP24387 322 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 CRABP1P29762 137 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 FMO3P31513 532 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 CENPAP49450 140 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 CDH11P55287 796 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 GABARAPL2P60520 117 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 MELKQ14680 651 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 ACSF3Q4G176 576 aaPredicted RBP12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 SLC35D3Q5M8T2 416 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 LAIR2Q6ISS4 152 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 DNM1P34Q6PK57 102 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 FGD2Q7Z6J4 655 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 NOXO1Q8NFA2 376 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 OR5M9Q8NGP3 310 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 FAM57AQ8TBR7 257 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 PTP4A1Q93096 173 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 WNT2BQ93097 391 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 OTULINQ96BN8 352 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 INTS12Q96CB8 462 aaKnown RBP12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 TXNDC15Q96J42 360 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 TM9SF2Q99805 663 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 MRPL13Q9BYD1 178 aaKnown RBP12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 SYT4Q9H2B2 425 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 CCNB1IP1Q9NPC3 277 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 PARPBPQ9NWS1 579 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 CNOT2Q9NZN8 540 aaKnown RBP12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 AASSQ9UDR5 926 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 MOKQ9UQ07 419 aa12.93□□□□□ -0.34
NIPAL3-202ENST00000339255 PHF3Q92576 2039 aaKnown RBP12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 POLEQ07864 2286 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 SLC22A23A1A5C7 686 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 SLC35F4A4IF30 521 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 OR6C65A6NJZ3 312 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 PGA4P0DJD7 388 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 PGA3P0DJD8 388 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 SLC2A5P22732 501 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 HTR1FP30939 366 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 MTNR1AP48039 350 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 CLRN1P58418 232 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 THEM4Q5T1C6 240 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 LCN1P1Q5VSP4 162 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 NSUN5P2Q63ZY6 315 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 OR2A2Q6IF42 318 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 PCSK4Q6UW60 755 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 GFRALQ6UXV0 394 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 P4HA3Q7Z4N8 544 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 TMEM123Q8N131 208 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 ZIC4Q8N9L1 334 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 BPIFB6Q8NFQ5 453 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 IPCEF1Q8WWN9 437 aaPredicted RBP12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 GMPPAQ96IJ6 420 aaPredicted RBP12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 ZNF385AQ96PM9 386 aaKnown RBP12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 OR2M2Q96R28 347 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 TRIB1Q96RU8 372 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 RPRD1BQ9NQG5 326 aaKnown RBP12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 WARS2Q9UGM6 360 aaKnown RBP12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 ING1Q9UK53 422 aaPredicted RBP12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 FKBP7Q9Y680 259 aa12.92□□□□□ -0.34
NIPAL3-202ENST00000339255 INTS1Q8N201 2190 aaKnown RBP12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 EFCAB10A6NFE3 127 aa12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 PRRG2O14669 202 aa12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 FAM20BO75063 409 aa12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 TRMUO75648 421 aaKnown RBP12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 ZNF432O94892 652 aa12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 TPOP07202 933 aa12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 YES1P07947 543 aa12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 DBTP11182 482 aaKnown RBP12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 PIPP12273 146 aaPredicted RBP12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 SPI1P17947 270 aa12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 BLVRAP53004 296 aa12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 ZNF91Q05481 1191 aa12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 POU4F2Q12837 409 aa12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 SMN1Q16637 294 aaKnown RBP12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 EIF2S3LQ2VIR3 472 aaKnown RBP12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 PRR30Q53SZ7 412 aaPredicted RBP12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 MEPCEQ7L2J0 689 aaKnown RBP12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 AAED1Q7RTV5 226 aa12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 RBP7Q96R05 134 aa12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 EMC6Q9BV81 110 aa12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 HCAR1Q9BXC0 346 aa12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 RACGAP1Q9H0H5 632 aa12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 ZNF696Q9H7X3 374 aa12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 ASB6Q9NWX5 421 aa12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 IGSF10Q6WRI0 2623 aa12.91□□□□□ -0.34
NIPAL3-202ENST00000339255 FREM1Q5H8C1 2179 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 TRIM64A6NGJ6 449 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 H7C1C5 153 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 XPNPEP2O43895 674 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 SLC19A2O60779 497 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 SLC43A1O75387 559 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 TGM6O95932 706 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 LYNP07948 512 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 CSNK1A1P48729 337 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 NUDT6P53370 316 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 RPS7P62081 194 aaKnown RBP12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 LCN6P62502 163 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 RUNX1T1Q06455 604 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 CAMK2DQ13557 499 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 APOFQ13790 326 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 HIST3H3Q16695 136 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms