RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 EMC6Q9BV81 110 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 GPR87Q9BY21 358 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 NPIPA1Q9UND3 350 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 A0A075B6Q4 140 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 SNPHO15079 494 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 TRIM3O75382 744 aaPredicted RBP20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 IGHMP01871 453 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 OR8G3PP0DMU2 310 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 KLK2P20151 261 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 MAP2K6P52564 334 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 OR2B6P58173 313 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 HSF1Q00613 529 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 FMODQ06828 376 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 SLC35D2Q76EJ3 337 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 EGFL6Q8IUX8 553 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 ABHD4Q8TB40 342 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 COQ7Q99807 217 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 PDCD1LG2Q9BQ51 273 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 MED18Q9BUE0 208 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 VSX1Q9NZR4 365 aaPredicted RBP20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 ASPMQ8IZT6 3477 aa20.12■□□□□ 0.81
PDLIM2-203ENST00000339162 ZNF814B7Z6K7 855 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 C21orf140B9A014 251 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 RPP14O95059 124 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 EDNRAP25101 427 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 GPR85P60893 370 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 ZP4Q12836 540 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 TOMM20Q15388 145 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 RAET1LQ5VY80 246 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 CDC20BQ86Y33 519 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 LAX1Q8IWV1 398 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 PARP16Q8N5Y8 322 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 PRSS33Q8NF86 280 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 FNDC8Q8TC99 324 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 ASB10Q8WXI3 467 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 INTS14Q96SY0 518 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 SIAEQ9HAT2 523 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 PALMDQ9NP74 551 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 LAMP5Q9UJQ1 280 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 FKBP7Q9Y680 259 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 DOCK10Q96BY6 2186 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 A0A087WV48 116 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 A0A1W2PPK0 400 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 EIF1P41567 113 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 GDI2P50395 445 aaKnown RBP20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 CDK5R1Q15078 307 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 MEP1BQ16820 701 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 TIGD3Q6B0B8 471 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 H3F3CQ6NXT2 135 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 CEACAM19Q7Z692 300 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 GPAT4Q86UL3 456 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 THEM6Q8WUY1 208 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 HSD17B8Q92506 261 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 ZBTB8AQ96BR9 441 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 SGCZQ96LD1 299 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 B3GAT1Q9P2W7 334 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 CRNNQ9UBG3 495 aaPredicted RBP20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 B3GALT5Q9Y2C3 310 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 CACNA1CQ13936 2221 aa20.11■□□□□ 0.81
PDLIM2-203ENST00000339162 TRBV2A0A0J9YWF9 115 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 STMND1H3BQB6 276 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 ZIC3O60481 467 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 FTH1P19P0C7X4 201 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 TNFSF8P32971 234 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 NUBP1P53384 320 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 OC90Q02509 493 aaPredicted RBP20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 SELENBP1Q13228 472 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 ZNF684Q5T5D7 378 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 LRRC69Q6ZNQ3 347 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 DND1Q8IYX4 353 aaKnown RBP20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 CEP19Q96LK0 163 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 AMELYQ99218 206 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 STMN3Q9NZ72 180 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 KCNG2Q9UJ96 466 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 DKKL1Q9UK85 242 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 POLHQ9Y253 713 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 IGLV1-36A0A0B4J1U3 117 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 MAGEB3O15480 346 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 OGG1O15527 345 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 RAMP1O60894 148 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 MPZL1O95297 269 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 P04436 131 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 ADH6P28332 368 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 PPP5CP53041 499 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 NANOS3P60323 173 aaKnown RBP20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 ZNF227Q86WZ6 799 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 GTPBP8Q8N3Z3 284 aaPredicted RBP20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 SMIM19Q96E16 107 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 KCNN2Q9H2S1 579 aa20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 MRPL22Q9NWU5 206 aaKnown RBP20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 MRM2Q9UI43 246 aaKnown RBP20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 COA3Q9Y2R0 106 aaPredicted RBP20.1■□□□□ 0.81
PDLIM2-203ENST00000339162 ZNF593O00488 134 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-203ENST00000339162 DSCR4P56555 118 aaPredicted RBP20.09■□□□□ 0.81
PDLIM2-203ENST00000339162 HSF2Q03933 536 aa20.09■□□□□ 0.81
PDLIM2-203ENST00000339162 ACSM3Q53FZ2 586 aa20.09■□□□□ 0.81
PDLIM2-203ENST00000339162 PXKQ7Z7A4 578 aa20.09■□□□□ 0.81
PDLIM2-203ENST00000339162 GLRX5Q86SX6 157 aa20.09■□□□□ 0.81
PDLIM2-203ENST00000339162 IL22RA1Q8N6P7 574 aa20.09■□□□□ 0.81
PDLIM2-203ENST00000339162 NTNG2Q96CW9 530 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms