RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 B3GNT2Q9NY97 397 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 A8MVM7 634 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 ACTL6BO94805 426 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 PMS2P2O95744 297 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 TGM4P49221 684 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 AFF3P51826 1226 aaKnown RBP12.65□□□□□ -0.38
RTN4-202ENST00000337526 PLA2G7Q13093 441 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 MFAP5Q13361 173 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 TPBGQ13641 420 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 USP51Q70EK9 711 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 MOB3CQ70IA8 216 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 MISPQ8IVT2 679 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 OR52I2Q8NH67 350 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 SLC37A2Q8TED4 501 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 CNTNAP3Q9BZ76 1288 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 OR51B6Q9H340 312 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 ZNF286AQ9HBT8 521 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 TP53TG5Q9Y2B4 290 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 NSG1A0A0A6YYJ2 146 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 ICMTO60725 284 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 ALX3O95076 343 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 CXCL12P48061 93 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 MRPL19P49406 292 aaKnown RBP12.65□□□□□ -0.38
RTN4-202ENST00000337526 CSNK1EP49674 416 aaKnown RBP12.65□□□□□ -0.38
RTN4-202ENST00000337526 PCBD1P61457 104 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 ARHGAP11BQ3KRB8 267 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 PRAMEF20Q5VT98 475 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 FBXW12Q6X9E4 464 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 OVCH1Q7RTY7 1134 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 KLHDC8BQ8IXV7 354 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 OR51S1Q8NGJ8 323 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 PPP1R35Q8TAP8 253 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 RBPMSQ93062 196 aaKnown RBP12.65□□□□□ -0.38
RTN4-202ENST00000337526 NMNAT2Q9BZQ4 307 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 SLC6A13Q9NSD5 602 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 TMEFF2Q9UIK5 374 aaPredicted RBP12.65□□□□□ -0.38
RTN4-202ENST00000337526 SEC16AO15027 2179 aa12.65□□□□□ -0.38
RTN4-202ENST00000337526 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.65□□□□□ -0.39
RTN4-202ENST00000337526 GPR137BO60478 399 aa12.65□□□□□ -0.39
RTN4-202ENST00000337526 C1QAP02745 245 aa12.65□□□□□ -0.39
RTN4-202ENST00000337526 POU3F2P20265 443 aaPredicted RBP12.65□□□□□ -0.39
RTN4-202ENST00000337526 PYCR3Q53H96 274 aa12.65□□□□□ -0.39
RTN4-202ENST00000337526 YOD1Q5VVQ6 348 aaPredicted RBP12.65□□□□□ -0.39
RTN4-202ENST00000337526 SLC22A25Q6T423 547 aa12.65□□□□□ -0.39
RTN4-202ENST00000337526 NAT6Q93015 286 aa12.65□□□□□ -0.39
RTN4-202ENST00000337526 KIF25Q9UIL4 384 aa12.65□□□□□ -0.39
RTN4-202ENST00000337526 DNAJC13O75165 2243 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 FITM1A5D6W6 292 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 A6NCN8 305 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 DDAH2O95865 285 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 GDF1P27539 372 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 BSGP35613 385 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 CLDN17P56750 224 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 DGCR2P98153 550 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 RAB31Q13636 194 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 PAPD4Q6PIY7 484 aaKnown RBP12.64□□□□□ -0.39
RTN4-202ENST00000337526 KDM8Q8N371 416 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 FRZBQ92765 325 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 C19orf43Q9BQ61 176 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 ISYNA1Q9NPH2 558 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 FBXO7Q9Y3I1 522 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 ADAM18Q9Y3Q7 739 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 ASPDHA6ND91 283 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 STK17BO94768 372 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 ANXA7P20073 488 aaKnown RBP12.64□□□□□ -0.39
RTN4-202ENST00000337526 M6PRP20645 277 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 HSD17B7P56937 341 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 EEF1A2Q05639 463 aaKnown RBP12.64□□□□□ -0.39
RTN4-202ENST00000337526 ZNF169Q14929 603 aaPredicted RBP12.64□□□□□ -0.39
RTN4-202ENST00000337526 SLC16A14Q7RTX9 510 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 SYT9Q86SS6 491 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 OR13H1Q8NG92 308 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 DUSP23Q9BVJ7 150 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 FAM212BQ9NTI7 297 aaPredicted RBP12.64□□□□□ -0.39
RTN4-202ENST00000337526 PRAMEF27A3QJZ7 478 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 SCRG1O75711 98 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 ITGBL1O95965 494 aaPredicted RBP12.64□□□□□ -0.39
RTN4-202ENST00000337526 ITGB2P05107 769 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 CSF3P09919 207 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 HTR5AP47898 357 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 HCCSP53701 268 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 PRAMEF9Q5VWM5 478 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 CALHM3Q86XJ0 350 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 RNF141Q8WVD5 230 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 DCLRE1CQ96SD1 692 aaKnown RBP12.64□□□□□ -0.39
RTN4-202ENST00000337526 ARPC5LQ9BPX5 153 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 OR52A5Q9H2C5 316 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 TMEM100Q9NV29 134 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 OR52A1Q9UKL2 312 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 MMACHCQ9Y4U1 282 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 ARRDC5A6NEK1 342 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 POM121BA6NF01 834 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 TTLL8A6PVC2 850 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 HIST1H1CP16403 213 aaKnown RBP12.64□□□□□ -0.39
RTN4-202ENST00000337526 PRPH2P23942 346 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 TGFBR3Q03167 851 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 DUSP8Q13202 625 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 ADGRE4PQ86SQ3 457 aa12.64□□□□□ -0.39
RTN4-202ENST00000337526 BCL7CQ8WUZ0 217 aaPredicted RBP12.64□□□□□ -0.39
RTN4-202ENST00000337526 ARSGQ96EG1 525 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms