RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 TVP23AA6NH52 213 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 GJA5P36382 358 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 VHLLQ6RSH7 139 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 ZNF679Q8IYX0 411 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 DUSP19Q8WTR2 217 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 CPPED1Q9BRF8 314 aaPredicted RBP11.34□□□□□ -0.59
FN1-202ENST00000336916 RNF150Q9ULK6 438 aa11.34□□□□□ -0.59
FN1-202ENST00000336916 TMEM200CA6NKL6 621 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 METTL15P1P0C7V9 234 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 ZNF77Q15935 545 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 RPS19BP1Q86WX3 136 aaKnown RBP11.33□□□□□ -0.6
FN1-202ENST00000336916 CYB561A3Q8NBI2 242 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 PLEKHF2Q9H8W4 249 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 PATZ1Q9HBE1 687 aaKnown RBP11.33□□□□□ -0.6
FN1-202ENST00000336916 SPTAN1Q13813 2472 aaKnown RBP11.33□□□□□ -0.6
FN1-202ENST00000336916 LTBP4Q8N2S1 1624 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 SNAPINO95295 136 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 F7P08709 466 aaPredicted RBP11.33□□□□□ -0.6
FN1-202ENST00000336916 NFYBP25208 207 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 RPS18P62269 152 aaKnown RBP11.33□□□□□ -0.6
FN1-202ENST00000336916 C6orf183Q5T699 404 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 TERB2Q8NHR7 220 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 HAS2Q92819 552 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 VSX1Q9NZR4 365 aaPredicted RBP11.33□□□□□ -0.6
FN1-202ENST00000336916 F8W036 122 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 K7EPK0 472 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 CLIC3O95833 236 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 ZNF93P35789 620 aaPredicted RBP11.33□□□□□ -0.6
FN1-202ENST00000336916 HNF4GQ14541 408 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 OR8G1Q15617 311 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 ADGRG5Q8IZF4 528 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 FAM71E2Q8N5Q1 922 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 OR2A14Q96R47 310 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 PCDHGA1Q9Y5H4 931 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 MYOCOSA0A1B0GUC4 107 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 LFNGQ8NES3 379 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 ZNF582Q96NG8 517 aaPredicted RBP11.33□□□□□ -0.6
FN1-202ENST00000336916 OR11A1Q9GZK7 315 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 LHPPQ9H008 270 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 OLAHQ9NV23 265 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 HDGFL3Q9Y3E1 203 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 GVINP1Q7Z2Y8 2422 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 TMEM265A0A087WTH1 108 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 CNIH1O95406 144 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 HTR2CP28335 458 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 BIDP55957 195 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 CLN3Q13286 438 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 SLCO4C1Q6ZQN7 724 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 BEX2Q9BXY8 128 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 BEX1Q9HBH7 125 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 SMCO4Q9NRQ5 59 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 TRAV27A0A087WT01 109 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 LOC100289279A0A1B0GTE1 492 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 SMIM30A4D0T7 59 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 DYRK1AQ13627 763 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 DNAJA3Q96EY1 480 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 PLK3Q9H4B4 646 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 SYNPO2LQ9H987 977 aa11.33□□□□□ -0.6
FN1-202ENST00000336916 GMPR2Q9P2T1 348 aaKnown RBP11.33□□□□□ -0.6
FN1-202ENST00000336916 TMED7-TICAM2A0A0A6YYA0 188 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 J3QRK9 145 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 EVI2BP34910 448 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 CA5AP35218 305 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 CTSCP53634 463 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 PLA2G7Q13093 441 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 TP53I3Q53FA7 332 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 RNLSQ5VYX0 342 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 DEFB123Q8N688 67 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 PRDM4Q9UKN5 801 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 TMED7Q9Y3B3 224 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 CLDN24A6NM45 220 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 DEGS1O15121 323 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 SMAD9O15198 467 aaKnown RBP11.32□□□□□ -0.6
FN1-202ENST00000336916 ZNF749O43361 778 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 SFTPCP11686 197 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 AQP6Q13520 282 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 ZNF789Q5FWF6 425 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 ADGRE4PQ86SQ3 457 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 LSRQ86X29 649 aaPredicted RBP11.32□□□□□ -0.6
FN1-202ENST00000336916 CATSPERDQ86XM0 798 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 SLC37A2Q8TED4 501 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 CSN1S1P47710 185 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 OR2T35Q8NGX2 323 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 SORT1Q99523 831 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 OR51B6Q9H340 312 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 NPAP1Q9NZP6 1156 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 SH2D1BO14796 132 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 ENSAO43768 121 aaKnown RBP11.32□□□□□ -0.6
FN1-202ENST00000336916 THOC3Q96J01 351 aaKnown RBP11.32□□□□□ -0.6
FN1-202ENST00000336916 CHST11Q9NPF2 352 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 NPIPA5A0A0B4J1W7 369 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 TUSC2O75896 110 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 OR8U8P0C7N1 319 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 SLC6A11P48066 632 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 SIRPAP78324 504 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 EGR3Q06889 387 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 COL9A3Q14050 684 aaPredicted RBP11.32□□□□□ -0.6
FN1-202ENST00000336916 Q499Y3 187 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 FCRL6Q6DN72 434 aa11.32□□□□□ -0.6
FN1-202ENST00000336916 TFAP2EQ6VUC0 442 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms