RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 RASD2Q96D21 266 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 LRR1Q96L50 414 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 LINC00470Q9BZP3 86 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 RNPEPL1Q9HAU8 725 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 USE1Q9NZ43 259 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 M0R3G1 203 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 BHLHE40O14503 412 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 IMPA2O14732 288 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 ARPC3O15145 178 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 IDH3BO43837 385 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 MGRN1O60291 552 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 CNOT4O95628 575 aaKnown RBP12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 TXNDC12O95881 172 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 ALPLP05186 524 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 PGA4P0DJD7 388 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 PGA3P0DJD8 388 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 NOS3P29474 1203 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 ALDH3A2P51648 485 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 CRISP1P54107 249 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 SLC34A1Q06495 639 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 KRR1Q13601 381 aaKnown RBP12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 LRRC36Q1X8D7 754 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 FBXL19-AS1Q494R0 122 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 SLC35F1Q5T1Q4 408 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 Q6ZT83 130 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 GABRG1Q8N1C3 465 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 IQCF1Q8N6M8 205 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 SYT14Q8NB59 555 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 NOXO1Q8NFA2 376 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 OR2T33Q8NG76 320 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 OR4Q3Q8NH05 313 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 RNASE6Q93091 150 aaKnown RBP12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 TMEM54Q969K7 222 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 LRRC46Q96FV0 321 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 SLC29A1Q99808 456 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 MRPL13Q9BYD1 178 aaKnown RBP12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 B3GAT2Q9NPZ5 323 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 ASB6Q9NWX5 421 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 GALNT8Q9NY28 637 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 ELOVL5Q9NYP7 299 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 GLTPQ9NZD2 209 aa12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 FOXD3Q9UJU5 478 aaPredicted RBP12.43□□□□□ -0.42
APOBEC3B-202ENST00000335760 FREM1Q5H8C1 2179 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 CENPBD1B2RD01 187 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 ZNF587BE7ETH6 402 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 H7C1C5 153 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 XKRYO14609 159 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 HIST1H1CP16403 213 aaKnown RBP12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 IGHV1-2P23083 117 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 CD79BP40259 229 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 LCN6P62502 163 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 ESRRGP62508 458 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 ROR2Q01974 943 aaKnown RBP12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 TFF3Q07654 80 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 CD47Q08722 323 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 FAM27E3Q08E93 113 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 GINS1Q14691 196 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 PGGHGQ32M88 737 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 MESTQ5EB52 335 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 C9orf135Q5VTT2 229 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 SLC27A4Q6P1M0 643 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 LINGO2Q7L985 606 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 ABHD12BQ7Z5M8 362 aaPredicted RBP12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 CXorf67Q86X51 503 aaPredicted RBP12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 ALKBH3Q96Q83 286 aaPredicted RBP12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 KCNK17Q96T54 332 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 ALG12Q9BV10 488 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 ULBP2Q9BZM5 246 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 RIBC2Q9H4K1 309 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 GPR35Q9HC97 309 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 MALT1Q9UDY8 824 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 ENOPH1Q9UHY7 261 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 BAIAP2Q9UQB8 552 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 ORC6Q9Y5N6 252 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 MYO18BQ8IUG5 2567 aa12.42□□□□□ -0.42
APOBEC3B-202ENST00000335760 CASQ2O14958 399 aaPredicted RBP12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 ATP6V1G2O95670 118 aa12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 QDPRP09417 244 aa12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 PEX2P28328 305 aa12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 GRNP28799 593 aaKnown RBP12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 GRK5P34947 590 aa12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 CDKN2AP42771 156 aaKnown RBP12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 GIPRP48546 466 aa12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 FOXG1P55316 489 aaPredicted RBP12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 CDK5Q00535 292 aa12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 MYBPC1Q00872 1141 aa12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 RIPK1Q13546 671 aa12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 P2RY6Q15077 328 aa12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 TSC22D1Q15714 1073 aa12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 HIST3H3Q16695 136 aa12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 TMEM236Q5W0B7 351 aa12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 JAZF1Q86VZ6 243 aa12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 LNX2Q8N448 690 aa12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 OR52E2Q8NGJ4 325 aa12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 OR4K13Q8NH42 304 aa12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 MCHR2Q969V1 340 aa12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 RBP7Q96R05 134 aa12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 CRLF2Q9HC73 371 aa12.41□□□□□ -0.42
APOBEC3B-202ENST00000335760 SLC22A23A1A5C7 686 aa12.4□□□□□ -0.42
APOBEC3B-202ENST00000335760 PRSS37A4D1T9 235 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms