RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 TMEM72A0PK05 275 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 F5H0A9 414 aaPredicted RBP12.53□□□□□ -0.4
SYNE3-201ENST00000334258 LDB3O75112 727 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 ATG12O94817 140 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 CSN2P05814 226 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 LIPCP11150 499 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 ADRA2CP18825 462 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 CMPK1P30085 196 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 SEC13P55735 322 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 EXOSC7Q15024 291 aaKnown RBP12.53□□□□□ -0.4
SYNE3-201ENST00000334258 ERN2Q76MJ5 926 aaKnown RBP12.53□□□□□ -0.4
SYNE3-201ENST00000334258 TMEFF1Q8IYR6 380 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 C10orf53Q8N6V4 93 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 CCDC107Q8WV48 283 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 RASD2Q96D21 266 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 VRK1Q99986 396 aaPredicted RBP12.53□□□□□ -0.4
SYNE3-201ENST00000334258 NDRG3Q9UGV2 375 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 PLEKHM1Q9Y4G2 1056 aa12.53□□□□□ -0.4
SYNE3-201ENST00000334258 A0A0D9SG52 128 aa12.52□□□□□ -0.4
SYNE3-201ENST00000334258 OR5H14A6NHG9 310 aa12.52□□□□□ -0.4
SYNE3-201ENST00000334258 XRCC3O43542 346 aa12.52□□□□□ -0.4
SYNE3-201ENST00000334258 NARSO43776 548 aaKnown RBP12.52□□□□□ -0.4
SYNE3-201ENST00000334258 LYPD3O95274 346 aa12.52□□□□□ -0.4
SYNE3-201ENST00000334258 APEHP13798 732 aaKnown RBP12.52□□□□□ -0.4
SYNE3-201ENST00000334258 SPI1P17947 270 aa12.52□□□□□ -0.4
SYNE3-201ENST00000334258 MAPK3P27361 379 aaPredicted RBP12.52□□□□□ -0.4
SYNE3-201ENST00000334258 PRSS3P35030 304 aa12.52□□□□□ -0.4
SYNE3-201ENST00000334258 MNDAP41218 407 aa12.52□□□□□ -0.4
SYNE3-201ENST00000334258 SSTP61278 116 aa12.52□□□□□ -0.4
SYNE3-201ENST00000334258 ZNF425Q6IV72 752 aa12.52□□□□□ -0.4
SYNE3-201ENST00000334258 SPAG16Q8N0X2 631 aa12.52□□□□□ -0.4
SYNE3-201ENST00000334258 STEAP2Q8NFT2 490 aa12.52□□□□□ -0.4
SYNE3-201ENST00000334258 NKX3-1Q99801 234 aaPredicted RBP12.52□□□□□ -0.4
SYNE3-201ENST00000334258 LMAN2LQ9H0V9 348 aa12.52□□□□□ -0.4
SYNE3-201ENST00000334258 RXFP3Q9NSD7 469 aa12.52□□□□□ -0.4
SYNE3-201ENST00000334258 FLRT3Q9NZU0 649 aa12.52□□□□□ -0.4
SYNE3-201ENST00000334258 GTF2A1LQ9UNN4 478 aa12.52□□□□□ -0.4
SYNE3-201ENST00000334258 PLEKHA6Q9Y2H5 1048 aa12.52□□□□□ -0.4
SYNE3-201ENST00000334258 NOP16Q9Y3C1 178 aaKnown RBP12.52□□□□□ -0.4
SYNE3-201ENST00000334258 ETV7Q9Y603 341 aa12.52□□□□□ -0.4
SYNE3-201ENST00000334258 NGFRP08138 427 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 TACSTD2P09758 323 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 ADH5P11766 374 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 DLX2Q07687 328 aaPredicted RBP12.52□□□□□ -0.41
SYNE3-201ENST00000334258 SCGB2B2Q4G0G5 96 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 LIPNQ5VXI9 398 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 CYB5R2Q6BCY4 276 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 C5orf46Q6UWT4 87 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 RAB11FIP2Q7L804 512 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 OR2W3Q7Z3T1 314 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 SVBPQ8N300 66 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 OR4E2Q8NGC2 313 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 ZPLD1Q8TCW7 415 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 C2CD4CQ8TF44 421 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 TSSK2Q96PF2 358 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 TRPV4Q9HBA0 871 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 GPN3Q9UHW5 284 aaPredicted RBP12.52□□□□□ -0.41
SYNE3-201ENST00000334258 OR6C68A6NDL8 312 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 CCSO14618 274 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 MECP2P51608 486 aaKnown RBP12.52□□□□□ -0.41
SYNE3-201ENST00000334258 CAPZA1P52907 286 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 ELAVL3Q14576 367 aaKnown RBP12.52□□□□□ -0.41
SYNE3-201ENST00000334258 ZNF234Q14588 700 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 SWI5Q1ZZU3 235 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 STEAP1BQ6NZ63 245 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 RNF44Q7L0R7 432 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 PUSL1Q8N0Z8 303 aaKnown RBP12.52□□□□□ -0.41
SYNE3-201ENST00000334258 TMEM106AQ96A25 262 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 ULBP3Q9BZM4 244 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 WDR13Q9H1Z4 485 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 CHRNA9Q9UGM1 479 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 MKL2Q9ULH7 1088 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 PCDHB10Q9UN67 800 aa12.52□□□□□ -0.41
SYNE3-201ENST00000334258 LOC100509620A0A075B734 347 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 TMEM82A0PJX8 343 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 GGT3PA6NGU5 568 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 OR2AT4A6NND4 320 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 GP1BAP07359 652 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 VASPP50552 380 aaPredicted RBP12.51□□□□□ -0.41
SYNE3-201ENST00000334258 EFNB2P52799 333 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 MPPED2Q15777 294 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 SMAD2Q15796 467 aaKnown RBP12.51□□□□□ -0.41
SYNE3-201ENST00000334258 GUCA2BQ16661 112 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 NDUFAF7Q7L592 441 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 ZAR1Q86SH2 424 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 TMIEQ8NEW7 156 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 OR1S2Q8NGQ3 325 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 OR2L8Q8NGY9 312 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 THAP6Q8TBB0 222 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 PIGMQ9H3S5 423 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 KCNK15Q9H427 330 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 MKKSQ9NPJ1 570 aaPredicted RBP12.51□□□□□ -0.41
SYNE3-201ENST00000334258 SLC22A11Q9NSA0 550 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 UPB1Q9UBR1 384 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 FARSAQ9Y285 508 aaKnown RBP12.51□□□□□ -0.41
SYNE3-201ENST00000334258 TRAV8-7A0A075B6U6 113 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 M0QYG6 137 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 DNAJB6O75190 326 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 OR4E1P0C645 316 aa12.51□□□□□ -0.41
SYNE3-201ENST00000334258 CPMP14384 443 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms