RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 SEC22AQ96IW7 307 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 MICU1Q9BPX6 476 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 SELENOIQ9C0D9 397 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 ZNF350Q9GZX5 532 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 SMG9Q9H0W8 520 aaKnown RBP10.84□□□□□ -0.67
SHMT2-201ENST00000328923 H2AFY2Q9P0M6 372 aaPredicted RBP10.84□□□□□ -0.67
SHMT2-201ENST00000328923 KPTNQ9Y664 436 aa10.84□□□□□ -0.67
SHMT2-201ENST00000328923 SMCO3A2RU48 225 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 TBC1D3BA6NDS4 549 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 TMEM235A6NFC5 223 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 C9J4A7 227 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 H0YIV9 168 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 EPHX1P07099 455 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 TBC1D3HP0C7X1 549 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 MPC1LP0DKB6 136 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 TYRP1P17643 537 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 GDI1P31150 447 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 CDKN1BP46527 198 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 ATP1B3P54709 279 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 CDH11P55287 796 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 ZNF674Q2M3X9 581 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 AKR1C8PQ5T2L2 129 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 TBC1D3GQ6DHY5 549 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 FAM129CQ86XR2 697 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 MMP21Q8N119 569 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 NXPE1Q8N323 547 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 POGLUT1Q8NBL1 392 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 SEMA6DQ8NFY4 1073 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 MR1Q95460 341 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 UBQLN4Q9NRR5 601 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 LPAR3Q9UBY5 353 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 CRLS1Q9UJA2 301 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 A4GNTQ9UNA3 340 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 SLC5A10A0PJK1 596 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 MGAT4DA6NG13 374 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 CCSO14618 274 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 EFSO43281 561 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 CD8AP01732 235 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 F13BP05160 661 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 RHOCP08134 193 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 CD14P08571 375 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 ANXA4P09525 319 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-201ENST00000328923 TPT1P13693 172 aaKnown RBP10.83□□□□□ -0.68
SHMT2-201ENST00000328923 TACR3P29371 465 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 CEACAM8P31997 349 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-201ENST00000328923 SMIM11AP58511 58 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 ST8SIA6P61647 398 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 HBA1P69905 142 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 TMEM115Q12893 351 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-201ENST00000328923 MAPK14Q16539 360 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 CHST9Q7L1S5 443 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 CXXC5Q7LFL8 322 aaKnown RBP10.83□□□□□ -0.68
SHMT2-201ENST00000328923 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.83□□□□□ -0.68
SHMT2-201ENST00000328923 PEG10Q86TG7 708 aaKnown RBP10.83□□□□□ -0.68
SHMT2-201ENST00000328923 SLC35F3Q8IY50 421 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 STEAP2Q8NFT2 490 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 ASB11Q8WXH4 323 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 OR2M4Q96R27 311 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 S100A13Q99584 98 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 GPA33Q99795 319 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 TMEM121BQ9BXQ6 578 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-201ENST00000328923 RGCCQ9H4X1 137 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 EGLN3Q9H6Z9 239 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 IL26Q9NPH9 171 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 ABRACLQ9P1F3 81 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 SH3BGRL2Q9UJC5 107 aa10.83□□□□□ -0.68
SHMT2-201ENST00000328923 ZFP37Q9Y6Q3 630 aaPredicted RBP10.83□□□□□ -0.68
SHMT2-201ENST00000328923 ANTXRLA6NF34 631 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 SIAH2O43255 324 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 PCCBP05166 539 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 ASGR2P07307 311 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 SLC25A4P12235 298 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 CD46P15529 392 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 GPR15P49685 360 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 CDK5Q00535 292 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 UBE2NLQ5JXB2 153 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 LINGO4Q6UY18 593 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 RBM45Q8IUH3 476 aaKnown RBP10.82□□□□□ -0.68
SHMT2-201ENST00000328923 BAP18Q8IXM2 172 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 RFKQ969G6 155 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 DTD2Q96FN9 168 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 YPEL4Q96NS1 127 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 FCRL4Q96PJ5 515 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 TBX5Q99593 518 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 TRPV4Q9HBA0 871 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 LHX3Q9UBR4 397 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 SLC23A2Q9UGH3 650 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 TET1Q8NFU7 2136 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 A0A0B4J2A0 478 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 ZNF705GA8MUZ8 300 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-201ENST00000328923 HSBP1L1C9JCN9 74 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 NME6O75414 186 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-201ENST00000328923 PPP1R3DO95685 299 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 TIA1P31483 386 aaKnown RBP eCLIP10.82□□□□□ -0.683e-16■■■□□ 15.8
SHMT2-201ENST00000328923 SERPINF1P36955 418 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 ID4P47928 161 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 PTH2RP49190 550 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 P2RX1P51575 399 aa10.82□□□□□ -0.68
SHMT2-201ENST00000328923 NKX6-1P78426 367 aaPredicted RBP10.82□□□□□ -0.68
SHMT2-201ENST00000328923 CBFBQ13951 182 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms