RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 SCO1O75880 301 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 OR6A2O95222 327 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 ECDO95905 644 aaPredicted RBP12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 MST1P26927 711 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 CCKBRP32239 447 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 FNTBP49356 437 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 CCINQ13939 588 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 FAM69AQ5T7M9 428 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 SLC6A19Q695T7 634 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 MAMSTRQ6ZN01 415 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 MARCH3Q86UD3 253 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 ZNF440Q8IYI8 595 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 MAP6Q96JE9 813 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 TRAF4Q9BUZ4 470 aaPredicted RBP12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 ELF5Q9UKW6 265 aaPredicted RBP12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 SLC6A5Q9Y345 797 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 TMEM150CB9EJG8 249 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 XKRYO14609 159 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 LTBRP36941 435 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 NR0B1P51843 470 aaKnown RBP12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 HSD17B7P56937 341 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 ARPC4P59998 168 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 PSMA6P60900 246 aaKnown RBP12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 UBE2MP61081 183 aaKnown RBP12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 SKP2Q13309 424 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 EXOSC2Q13868 293 aaKnown RBP12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 CBFBQ13951 182 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 UBXN2BQ14CS0 331 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 FAM209AQ5JX71 171 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 FAM122BQ7Z309 247 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 DND1Q8IYX4 353 aaKnown RBP12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 OR2G2Q8NGZ5 317 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 OR8S1Q8NH09 359 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 WDR89Q96FK6 387 aaPredicted RBP12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 MYEF2Q9P2K5 600 aaKnown RBP12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 PLCL2Q9UPR0 1127 aa12.75□□□□□ -0.37
ATP2C1-201ENST00000328560 ZNF749O43361 778 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 MPC2O95563 127 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 CFDP00746 253 aaPredicted RBP12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 ENPP1P22413 925 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 HLA-DQA1Q5Y7H0 255 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 CHMP1BQ7LBR1 199 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 PTPMT1Q8WUK0 201 aaPredicted RBP12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 METTL21AQ8WXB1 218 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 PHYHIPQ92561 330 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 LMAN1LQ9HAT1 526 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 M0R233 179 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 CTDSPLO15194 276 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 ZNF217O75362 1048 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 SLC25A12O75746 678 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 WISP1O95388 367 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 SIX6O95475 246 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 SPARCP09486 303 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 IL12BP29460 328 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 FOXL2P58012 376 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 GUCA2AQ02747 115 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 SQSTM1Q13501 440 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 IL10RAQ13651 578 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 CLPPQ16740 277 aaPredicted RBP12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 PCGF3Q3KNV8 242 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 TCTE1Q5JU00 501 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 OR5M10Q6IEU7 315 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 SHISA6Q6ZSJ9 500 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 KDM8Q8N371 416 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 ADAMTS18Q8TE60 1221 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 KLHL15Q96M94 604 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 INTS14Q96SY0 518 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 GINS4Q9BRT9 223 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 SLC19A3Q9BZV2 496 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 ELOVL3Q9HB03 270 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 CA10Q9NS85 328 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 SLC22A13Q9Y226 551 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 LAMA1P25391 3075 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 MAPK3P27361 379 aaPredicted RBP12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 CD38P28907 300 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 NUDT1P36639 197 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 CAPZBP47756 277 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 RAB14P61106 215 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 GRK1Q15835 563 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 METTL11BQ5VVY1 283 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 RNF166Q96A37 237 aaPredicted RBP12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 CCDC74AQ96AQ1 378 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 HAVCR1Q96D42 359 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 HEXA-AS1Q9H8Q6 139 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 PCDHGA5Q9Y5G8 931 aa12.74□□□□□ -0.37
ATP2C1-201ENST00000328560 UNC13CQ8NB66 2214 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 TRAV18A0A075B6X5 111 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 ACOT7O00154 380 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 EFNB2P52799 333 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 C19orf57Q0VDD7 668 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 MEP1BQ16820 701 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 TOR2AQ5JU69 321 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 C1orf189Q5VU69 101 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 CHRDL2Q6WN34 429 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 FAM174AQ8TBP5 190 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 OMA1Q96E52 524 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 CCDC120Q96HB5 630 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 TBL1XR1Q9BZK7 514 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 MOKQ9UQ07 419 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms