RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 LSM14AQ8ND56 463 aaKnown RBP15.22■□□□□ 0.03
SSH1-201ENST00000326470 TRAV18A0A075B6X5 111 aa15.21■□□□□ 0.03
SSH1-201ENST00000326470 EFCAB7A8K855 629 aa15.21■□□□□ 0.03
SSH1-201ENST00000326470 MTRF1O75570 445 aaKnown RBP15.21■□□□□ 0.03
SSH1-201ENST00000326470 ADH1BP00325 375 aa15.21■□□□□ 0.03
SSH1-201ENST00000326470 DEFA5Q01523 94 aa15.21■□□□□ 0.03
SSH1-201ENST00000326470 FLI1Q01543 452 aaPredicted RBP15.21■□□□□ 0.03
SSH1-201ENST00000326470 SSBP1Q04837 148 aaKnown RBP15.21■□□□□ 0.03
SSH1-201ENST00000326470 STEAP1BQ6NZ63 245 aa15.21■□□□□ 0.03
SSH1-201ENST00000326470 JAZF1Q86VZ6 243 aa15.21■□□□□ 0.03
SSH1-201ENST00000326470 CDC20BQ86Y33 519 aa15.21■□□□□ 0.03
SSH1-201ENST00000326470 OR2G2Q8NGZ5 317 aa15.21■□□□□ 0.03
SSH1-201ENST00000326470 OR10AC1Q8NH08 325 aa15.21■□□□□ 0.03
SSH1-201ENST00000326470 GPR148Q8TDV2 347 aa15.21■□□□□ 0.03
SSH1-201ENST00000326470 CCDC107Q8WV48 283 aa15.21■□□□□ 0.03
SSH1-201ENST00000326470 ANKRD9Q96BM1 317 aaPredicted RBP15.21■□□□□ 0.03
SSH1-201ENST00000326470 OR2M4Q96R27 311 aa15.21■□□□□ 0.03
SSH1-201ENST00000326470 SLC17A9Q9BYT1 436 aa15.21■□□□□ 0.03
SSH1-201ENST00000326470 COMMD4Q9H0A8 199 aa15.21■□□□□ 0.03
SSH1-201ENST00000326470 MRTO4Q9UKD2 239 aaKnown RBP15.21■□□□□ 0.03
SSH1-201ENST00000326470 CDV3Q9UKY7 258 aaKnown RBP15.21■□□□□ 0.03
SSH1-201ENST00000326470 YBX2Q9Y2T7 364 aaKnown RBP15.21■□□□□ 0.03
SSH1-201ENST00000326470 PRELID3BQ9Y3B1 194 aa15.21■□□□□ 0.03
SSH1-201ENST00000326470 ZNF175Q9Y473 711 aa15.21■□□□□ 0.03
SSH1-201ENST00000326470 CHD7Q9P2D1 2997 aa15.21■□□□□ 0.03
SSH1-201ENST00000326470 FAM74A7A6NL05 159 aa15.21■□□□□ 0.02
SSH1-201ENST00000326470 H0YGG7 62 aa15.21■□□□□ 0.02
SSH1-201ENST00000326470 GLULP15104 373 aa15.21■□□□□ 0.02
SSH1-201ENST00000326470 ACHEP22303 614 aa15.21■□□□□ 0.02
SSH1-201ENST00000326470 ARF3P61204 181 aaPredicted RBP15.21■□□□□ 0.02
SSH1-201ENST00000326470 ZNHIT3Q15649 155 aaPredicted RBP15.21■□□□□ 0.02
SSH1-201ENST00000326470 FAM74A3Q4VXF1 159 aa15.21■□□□□ 0.02
SSH1-201ENST00000326470 PABPC1L2AQ5JQF8 200 aa15.21■□□□□ 0.02
SSH1-201ENST00000326470 PDSS1Q5T2R2 415 aa15.21■□□□□ 0.02
SSH1-201ENST00000326470 BIVMQ86UB2 503 aa15.21■□□□□ 0.02
SSH1-201ENST00000326470 TMEM17Q86X19 198 aa15.21■□□□□ 0.02
SSH1-201ENST00000326470 C12orf45Q8N5I9 185 aaPredicted RBP15.21■□□□□ 0.02
SSH1-201ENST00000326470 ZNF676Q8N7Q3 588 aa15.21■□□□□ 0.02
SSH1-201ENST00000326470 OR8K3Q8NH51 312 aa15.21■□□□□ 0.02
SSH1-201ENST00000326470 POFUT1Q9H488 388 aa15.21■□□□□ 0.02
SSH1-201ENST00000326470 TAS2R3Q9NYW6 316 aa15.21■□□□□ 0.02
SSH1-201ENST00000326470 A0A1W2PQU0 124 aa15.2■□□□□ 0.02
SSH1-201ENST00000326470 MEIS3P1A6NDR6 274 aa15.2■□□□□ 0.02
SSH1-201ENST00000326470 TMEM212A6NML5 194 aa15.2■□□□□ 0.02
SSH1-201ENST00000326470 GRXCR1A8MXD5 290 aa15.2■□□□□ 0.02
SSH1-201ENST00000326470 NPIPB9F8W1W9 429 aa15.2■□□□□ 0.02
SSH1-201ENST00000326470 SIGLEC5O15389 551 aa15.2■□□□□ 0.02
SSH1-201ENST00000326470 OR4E1P0C645 316 aa15.2■□□□□ 0.02
SSH1-201ENST00000326470 POU3F4P49335 361 aa15.2■□□□□ 0.02
SSH1-201ENST00000326470 SIGLEC14Q08ET2 396 aa15.2■□□□□ 0.02
SSH1-201ENST00000326470 TCEA2Q15560 299 aa15.2■□□□□ 0.02
SSH1-201ENST00000326470 FAM122BQ7Z309 247 aa15.2■□□□□ 0.02
SSH1-201ENST00000326470 OR51A4Q8NGJ6 313 aa15.2■□□□□ 0.02
SSH1-201ENST00000326470 OR8S1Q8NH09 359 aa15.2■□□□□ 0.02
SSH1-201ENST00000326470 ATOH1Q92858 354 aaPredicted RBP15.2■□□□□ 0.02
SSH1-201ENST00000326470 DVL3Q92997 716 aaPredicted RBP15.2■□□□□ 0.02
SSH1-201ENST00000326470 MCHR2Q969V1 340 aa15.2■□□□□ 0.02
SSH1-201ENST00000326470 ZFYVE21Q9BQ24 234 aa15.2■□□□□ 0.02
SSH1-201ENST00000326470 UPB1Q9UBR1 384 aa15.2■□□□□ 0.02
SSH1-201ENST00000326470 CYB5R1Q9UHQ9 305 aa15.2■□□□□ 0.02
SSH1-201ENST00000326470 IKZF2Q9UKS7 526 aa15.2■□□□□ 0.02
SSH1-201ENST00000326470 PRSS38A1L453 326 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 BLOC1S5-TXNDC5H3BN57 136 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 WNT11O96014 354 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 CD8AP01732 235 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 SLC35E2P0CK97 266 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 S1PR1P21453 382 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 AQP2P41181 271 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 MC2RQ01718 297 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 FAM74A1Q5RGS3 127 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 PSRC1Q6PGN9 363 aaPredicted RBP15.19■□□□□ 0.02
SSH1-201ENST00000326470 CA13Q8N1Q1 262 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 GPX8Q8TED1 209 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 EDAQ92838 391 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 RERGQ96A58 199 aaPredicted RBP15.19■□□□□ 0.02
SSH1-201ENST00000326470 C3orf49Q96BT1 292 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 SLC19A3Q9BZV2 496 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 NKX6-2Q9C056 277 aaPredicted RBP15.19■□□□□ 0.02
SSH1-201ENST00000326470 LAMP5Q9UJQ1 280 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 EML5Q05BV3 1969 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 CEP290O15078 2479 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 CDC40O60508 579 aaKnown RBP eCLIP15.19■□□□□ 0.02
SSH1-201ENST00000326470 SRPX2O60687 465 aaPredicted RBP15.19■□□□□ 0.02
SSH1-201ENST00000326470 CD14P08571 375 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 APEHP13798 732 aaKnown RBP15.19■□□□□ 0.02
SSH1-201ENST00000326470 FGL1Q08830 312 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 CLVS2Q5SYC1 327 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 SHEQ5VZ18 495 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 GABRG1Q8N1C3 465 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 BEST3Q8N1M1 668 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 KCNRGQ8N5I3 272 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 BPIFCQ8NFQ6 507 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 RSC1A1Q92681 617 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 TWSG1Q9GZX9 223 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 HPF1Q9NWY4 346 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 DPP7Q9UHL4 492 aa15.19■□□□□ 0.02
SSH1-201ENST00000326470 KLF2Q9Y5W3 355 aaPredicted RBP15.19■□□□□ 0.02
SSH1-201ENST00000326470 IGKV1D-42A0A075B6H8 117 aa15.18■□□□□ 0.02
SSH1-201ENST00000326470 TRBV23OR9-2A0A075B6M9 112 aa15.18■□□□□ 0.02
SSH1-201ENST00000326470 OR6C74A6NCV1 312 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms