RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 TM7SF3Q9NS93 570 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 TMEM184BQ9Y519 407 aaPredicted RBP13.5□□□□□ -0.25
NUP98-201ENST00000324932 TUSC2O75896 110 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 PMPCAQ10713 525 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 COL9A2Q14055 689 aaPredicted RBP13.5□□□□□ -0.25
NUP98-201ENST00000324932 GTF2H5Q6ZYL4 71 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 KANSL1Q7Z3B3 1105 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 C1QTNF3Q9BXJ4 246 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 KLF16Q9BXK1 252 aaPredicted RBP13.5□□□□□ -0.25
NUP98-201ENST00000324932 EMC9Q9Y3B6 208 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 PTRH2Q9Y3E5 179 aaKnown RBP13.5□□□□□ -0.25
NUP98-201ENST00000324932 TRBV11-1A0A0K0K1C0 115 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 PSMB5P28074 263 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 H3F3AP84243 136 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 SMAD2Q15796 467 aaKnown RBP13.5□□□□□ -0.25
NUP98-201ENST00000324932 FAM162BQ5T6X4 162 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 NLRC3Q7RTR2 1065 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 OR1M1Q8NGA1 313 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 SLC22A12Q96S37 553 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 CTSAP10619 480 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 ADRA2CP18825 462 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 NKX2-1P43699 371 aaPredicted RBP13.5□□□□□ -0.25
NUP98-201ENST00000324932 ISL1P61371 349 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 SLC35A1P78382 337 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 Q6ZSR6 202 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 PELI3Q8N2H9 469 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 KDF1Q8NAX2 398 aaPredicted RBP13.5□□□□□ -0.25
NUP98-201ENST00000324932 OR1J2Q8NGS2 313 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 WDR83Q9BRX9 315 aaKnown RBP13.5□□□□□ -0.25
NUP98-201ENST00000324932 TMEM43Q9BTV4 400 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 NKX2-4Q9H2Z4 354 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 SPACA1Q9HBV2 294 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 A6NL46 340 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 ENDOGQ14249 297 aaKnown RBP13.5□□□□□ -0.25
NUP98-201ENST00000324932 BTNL8Q6UX41 500 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 GDPD3Q7L5L3 318 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 AAED1Q7RTV5 226 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 UBQLN3Q9H347 655 aa13.5□□□□□ -0.25
NUP98-201ENST00000324932 SPATA6Q9NWH7 488 aaPredicted RBP13.5□□□□□ -0.25
NUP98-201ENST00000324932 OPN1LWP04000 364 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 SLC35A2P78381 396 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 TMEM176BQ3YBM2 270 aaPredicted RBP13.49□□□□□ -0.25
NUP98-201ENST00000324932 GDF7Q7Z4P5 450 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 CATSPERDQ86XM0 798 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 CCNL2Q96S94 520 aaPredicted RBP13.49□□□□□ -0.25
NUP98-201ENST00000324932 ZNF251Q9BRH9 671 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 ZNF587BE7ETH6 402 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 RGS11O94810 467 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 GLCEO94923 617 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 IQCF3P0C7M6 154 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 TEKQ02763 1124 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 IHHQ14623 411 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 GLIPR1L1Q6UWM5 242 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 BPIFCQ8NFQ6 507 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 GPR78Q96P69 363 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 SSUH2Q9Y2M2 353 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 PPLO60437 1756 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 CAMTA1Q9Y6Y1 1673 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 CD80P33681 288 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 CLDN17P56750 224 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 CDC20Q12834 499 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 FAM74A1Q5RGS3 127 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 NAXDQ8IW45 347 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 OR5K2Q8NHB8 316 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 REEP6Q96HR9 211 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 TPPP3Q9BW30 176 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 DYNLRB1Q9NP97 96 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 ASIC5Q9NY37 505 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 CLEC2DQ9UHP7 191 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 BOKQ9UMX3 212 aaPredicted RBP13.49□□□□□ -0.25
NUP98-201ENST00000324932 KIR2DS1A0A191URI9 304 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 XRCC3O43542 346 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 CSF2RAP15509 400 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 KIR2DS4P43632 304 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 KIR2DS1Q14954 304 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 TTC9BQ8N6N2 239 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 SLC35G3Q8N808 338 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 CXorf36Q9H7Y0 433 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 LAMTOR5O43504 91 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 POU3F3P20264 500 aaPredicted RBP13.49□□□□□ -0.25
NUP98-201ENST00000324932 SRP9P49458 86 aaKnown RBP13.49□□□□□ -0.25
NUP98-201ENST00000324932 GSK3AP49840 483 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 SLCO4C1Q6ZQN7 724 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 HTR3DQ70Z44 454 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 FGGYQ96C11 551 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 FAM122AQ96E09 287 aa13.49□□□□□ -0.25
NUP98-201ENST00000324932 GFRA2O00451 464 aa13.48□□□□□ -0.25
NUP98-201ENST00000324932 DUSP1P28562 367 aa13.48□□□□□ -0.25
NUP98-201ENST00000324932 RACK1P63244 317 aaKnown RBP13.48□□□□□ -0.25
NUP98-201ENST00000324932 PDZD11Q5EBL8 140 aa13.48□□□□□ -0.25
NUP98-201ENST00000324932 ZNF852Q6ZMS4 543 aa13.48□□□□□ -0.25
NUP98-201ENST00000324932 SYT17Q9BSW7 474 aa13.48□□□□□ -0.25
NUP98-201ENST00000324932 PRAMEF4O60810 478 aa13.48□□□□□ -0.25
NUP98-201ENST00000324932 MTHFD2P13995 350 aa13.48□□□□□ -0.25
NUP98-201ENST00000324932 GABREP78334 506 aa13.48□□□□□ -0.25
NUP98-201ENST00000324932 CPEB2Q7Z5Q1 589 aaKnown RBP13.48□□□□□ -0.25
NUP98-201ENST00000324932 LRRC18Q8N456 261 aa13.48□□□□□ -0.25
NUP98-201ENST00000324932 TPSD1Q9BZJ3 242 aa13.48□□□□□ -0.25
NUP98-201ENST00000324932 AK3Q9UIJ7 227 aa13.48□□□□□ -0.25
NUP98-201ENST00000324932 PNPP00491 289 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms