RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 OR10K2Q6IF99 312 aa19.42■□□□□ 0.7
RNF40-201ENST00000324685 Q6ZSR9 355 aa19.42■□□□□ 0.7
RNF40-201ENST00000324685 NAXDQ8IW45 347 aa19.42■□□□□ 0.7
RNF40-201ENST00000324685 hCG_1809904A0A1W2PP81 198 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 A0A1W2PPE2 198 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 A0A1W2PR64 198 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 A0A1W2PRV1 198 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 MT-ATP6P00846 226 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 PSMB3P49720 205 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 RRADP55042 308 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 NHSL2Q5HYW2 709 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 PAPD4Q6PIY7 484 aaKnown RBP19.41■□□□□ 0.7
RNF40-201ENST00000324685 DPPA2Q7Z7J5 298 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 TMEFF1Q8IYR6 380 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 CELF2-AS1Q8N7Q2 184 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 YIPF5Q969M3 257 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 DNMT3BQ9UBC3 853 aaKnown RBP19.41■□□□□ 0.7
RNF40-201ENST00000324685 MYH11P35749 1972 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 ZNF587BE7ETH6 402 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 CD14P08571 375 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 RFX2P48378 723 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 LGI3Q8N145 548 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 SCARB1Q8WTV0 552 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 NIPSNAP1Q9BPW8 284 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 ZNF891A8MT65 544 aaPredicted RBP19.41■□□□□ 0.7
RNF40-201ENST00000324685 ADAM10O14672 748 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 ACOT8O14734 319 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 BTG1P62324 171 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 FAPQ12884 760 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 ANKLE1Q8NAG6 615 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 PCDHGA5Q9Y5G8 931 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 MYH3P11055 1940 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 IMPA2O14732 288 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 ABHD16AO95870 558 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 POLR2IP36954 125 aaKnown RBP19.41■□□□□ 0.7
RNF40-201ENST00000324685 ZMAT1Q5H9K5 638 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 OR5D18Q8NGL1 313 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 FGGYQ96C11 551 aa19.41■□□□□ 0.7
RNF40-201ENST00000324685 M0QYG6 137 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 DDOSTP39656 456 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 FAM78AQ5JUQ0 283 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 OVCH1Q7RTY7 1134 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 ZNF416Q9BWM5 594 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 WWTR1Q9GZV5 400 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 ARV1Q9H2C2 271 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 TRABD2BA6NFA1 517 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 GFRA2O00451 464 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 NXPH2O95156 264 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 ARL16Q0P5N6 197 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 CLINT1Q14677 625 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 MEP1BQ16820 701 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 KDM4DQ6B0I6 523 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 BAGE3Q86Y29 109 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 BAGE2Q86Y30 109 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 UCN3Q969E3 161 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 STACQ99469 402 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 MYH6P13533 1939 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 MGST1P10620 155 aaKnown RBP19.4■□□□□ 0.7
RNF40-201ENST00000324685 PRAMEF20Q5VT98 475 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 TRNP1Q6NT89 227 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 CATSPERDQ86XM0 798 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 LYSMD2Q8IV50 215 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 LINC00346Q8IVM7 164 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 ZFPM2Q8WW38 1151 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.4■□□□□ 0.7
RNF40-201ENST00000324685 ZNF26P17031 533 aaPredicted RBP19.4■□□□□ 0.7
RNF40-201ENST00000324685 CST5P28325 142 aaPredicted RBP19.4■□□□□ 0.7
RNF40-201ENST00000324685 TRIM23P36406 574 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 PMPCAQ10713 525 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 MFSD12Q6NUT3 480 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 PAQR9Q6ZVX9 377 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 HIST2H3AQ71DI3 136 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 FAM122BQ7Z309 247 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 MARC2Q969Z3 335 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 KIRREL1Q96J84 757 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 PURGQ9UJV8 347 aaKnown RBP19.4■□□□□ 0.7
RNF40-201ENST00000324685 CHD2O14647 1828 aaKnown RBP19.4■□□□□ 0.7
RNF40-201ENST00000324685 OR8U8P0C7N1 319 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 LFNGQ8NES3 379 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 PKMYT1Q99640 499 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 POFUT1Q9H488 388 aa19.4■□□□□ 0.7
RNF40-201ENST00000324685 TRHRP34981 398 aaPredicted RBP19.39■□□□□ 0.7
RNF40-201ENST00000324685 TMEM52BQ4KMG9 183 aa19.39■□□□□ 0.7
RNF40-201ENST00000324685 FAM71E1Q6IPT2 247 aa19.39■□□□□ 0.7
RNF40-201ENST00000324685 SAGE1Q9NXZ1 904 aa19.39■□□□□ 0.7
RNF40-201ENST00000324685 HEMK1Q9Y5R4 338 aaPredicted RBP19.39■□□□□ 0.7
RNF40-201ENST00000324685 CTNSO60931 367 aa19.39■□□□□ 0.69
RNF40-201ENST00000324685 LALBAP00709 142 aa19.39■□□□□ 0.69
RNF40-201ENST00000324685 CCR6P51684 374 aa19.39■□□□□ 0.69
RNF40-201ENST00000324685 GLYATL3Q5SZD4 288 aa19.39■□□□□ 0.69
RNF40-201ENST00000324685 PRSS35Q8N3Z0 413 aa19.39■□□□□ 0.69
RNF40-201ENST00000324685 RNF170Q96K19 258 aa19.39■□□□□ 0.69
RNF40-201ENST00000324685 SPINT2O43291 252 aa19.39■□□□□ 0.69
RNF40-201ENST00000324685 SLCO2B1O94956 709 aa19.39■□□□□ 0.69
RNF40-201ENST00000324685 PIPP12273 146 aaPredicted RBP19.39■□□□□ 0.69
RNF40-201ENST00000324685 C2orf76Q3KRA6 126 aa19.39■□□□□ 0.69
RNF40-201ENST00000324685 TMUB2Q71RG4 321 aa19.39■□□□□ 0.69
RNF40-201ENST00000324685 SLC35G3Q8N808 338 aa19.39■□□□□ 0.69
RNF40-201ENST00000324685 NPFFR2Q9Y5X5 522 aa19.39■□□□□ 0.69
RNF40-201ENST00000324685 C4orf47A7E2U8 309 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms