RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 L3HYPDHQ96EM0 354 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 CMSS1Q9BQ75 279 aaKnown RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 C1QTNF2Q9BXJ5 285 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 NPFFR2Q9Y5X5 522 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 DCCP43146 1447 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 A6NIZ1 184 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 ZNF724A8MTY0 619 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 P2RX6O15547 441 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 CALCBP10092 127 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 CRABP1P29762 137 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 RAP1BP61224 184 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 AANATQ16613 207 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 HACD4Q5VWC8 232 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 OR5M8Q8NGP6 311 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 OR5M11Q96RB7 305 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 CD207Q9UJ71 328 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 LRRK1Q38SD2 2015 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 SMAD6O43541 496 aaKnown RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 C5AR1P21730 350 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 ARNTP27540 789 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 TACR3P29371 465 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 SIGLECL1Q8N7X8 197 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 CLEC1AQ8NC01 280 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 SEMA6DQ8NFY4 1073 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 FAM3CQ92520 227 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 PLK3Q9H4B4 646 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 IFT22Q9H7X7 185 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 KCNIP2Q9NS61 270 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 ALDOCP09972 364 aaKnown RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 IQCF3P0C7M6 154 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 IMPA1P29218 277 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 AGFG1P52594 562 aaKnown RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 RPS16P62249 146 aaKnown RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 FLI1Q01543 452 aaPredicted RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 RBMS2Q15434 407 aaKnown RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.33□□□□□ -1.24
CIITA-201ENST00000324288 GCNT2Q8N0V5 402 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 WDTC1Q8N5D0 677 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 RAB39BQ96DA2 213 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 PCYT2Q99447 389 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 C12orf49Q9H741 205 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 ANKRD61A6NGH8 418 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 TCAPO15273 167 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 EFSO43281 561 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 HRO43593 1189 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 KCNK2O95069 426 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 DDAH2O95865 285 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 MFGE8Q08431 387 aaPredicted RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 OR5M1Q8NGP8 315 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 RXFP4Q8TDU9 374 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 SSSCA1O60232 199 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 GLSO94925 669 aaPredicted RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 IAPPP10997 89 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 HTR5AP47898 357 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 MRPL19P49406 292 aaKnown RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 HBG1P69891 147 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 HBG2P69892 147 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 OR5L1Q8NGL2 311 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 NKX3-1Q99801 234 aaPredicted RBP7.33□□□□□ -1.24
CIITA-201ENST00000324288 CTRCQ99895 268 aa7.33□□□□□ -1.24
CIITA-201ENST00000324288 GASTP01350 101 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 TLE4Q04727 773 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 SLC14A2Q15849 920 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 ZNF718Q3SXZ3 478 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 LYSMD2Q8IV50 215 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 OR4A16Q8NH70 328 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 RHOXF1Q8NHV9 184 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 TMEM163Q8TC26 289 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 NUDT8Q8WV74 236 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 GHSRQ92847 366 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 MAP6Q96JE9 813 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 CALHM2Q9HA72 323 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 INPP5EQ9NRR6 644 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 CNOT2Q9NZN8 540 aaKnown RBP7.32□□□□□ -1.24
CIITA-201ENST00000324288 DOCK5Q9H7D0 1870 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 CHEK1O14757 476 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 SUSD5O60279 629 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 DNAJB6O75190 326 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 OR7C1O76099 320 aaPredicted RBP7.32□□□□□ -1.24
CIITA-201ENST00000324288 APBB3O95704 486 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 SUMO1P63165 101 aaKnown RBP7.32□□□□□ -1.24
CIITA-201ENST00000324288 DGCR2P98153 550 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 GLYR1Q49A26 553 aaPredicted RBP7.32□□□□□ -1.24
CIITA-201ENST00000324288 SPRED1Q7Z699 444 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 OR2T11Q8NH01 316 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 KHSRPQ92945 711 aaKnown RBP eCLIP7.32□□□□□ -1.24
CIITA-201ENST00000324288 ADIPOR1Q96A54 375 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 RAB3CQ96E17 227 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 PELI2Q9HAT8 420 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 EMC9Q9Y3B6 208 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 MALRD1Q5VYJ5 2156 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 IGHG1P01857 330 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 CA3P07451 260 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 FCGR2AP12318 317 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 LBX1P52954 281 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 IAH1Q2TAA2 248 aaPredicted RBP7.32□□□□□ -1.24
CIITA-201ENST00000324288 CDH26Q8IXH8 852 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 L3MBTL4Q8NA19 623 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 PRSS21Q9Y6M0 314 aa7.32□□□□□ -1.24
CIITA-201ENST00000324288 A0A0J9YY10 115 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms