RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 TMEM272A0A1B0GTI8 110 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 F8VVB4 439 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 F8VWA3 439 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 SSX5O60225 188 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 SPP1P10451 314 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 PNMTP11086 282 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 ADRB3P13945 408 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 HIST1H1CP16403 213 aaKnown RBP4.36□□□□□ -1.71
PTPN13-201ENST00000316707 ACHEP22303 614 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 CSNK1EP49674 416 aaKnown RBP4.36□□□□□ -1.71
PTPN13-201ENST00000316707 TEAD2Q15562 447 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 TEX30Q5JUR7 227 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 FAM74A1Q5RGS3 127 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 EXOSC6Q5RKV6 272 aaKnown RBP4.36□□□□□ -1.71
PTPN13-201ENST00000316707 ASTLQ6HA08 431 aaPredicted RBP4.36□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF425Q6IV72 752 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 NUP54Q7Z3B4 507 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 CRIPAKQ8N1N5 446 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 C2orf73Q8N5S3 287 aaPredicted RBP4.36□□□□□ -1.71
PTPN13-201ENST00000316707 SLC22A8Q8TCC7 542 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 SEH1LQ96EE3 360 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 S100A13Q99584 98 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 ESRP2Q9H6T0 727 aaKnown RBP4.36□□□□□ -1.71
PTPN13-201ENST00000316707 SYNPO2LQ9H987 977 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 TXNDC12O95881 172 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 CRHP06850 196 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 CD79AP11912 226 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 ADRA2CP18825 462 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 CAV2P51636 162 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 PGDP52209 483 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 SKP1P63208 163 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 SLC39A5Q6ZMH5 540 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 SSX6Q7RTT6 188 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 MAMDC2Q7Z304 686 aaPredicted RBP4.36□□□□□ -1.71
PTPN13-201ENST00000316707 RCBTB1Q8NDN9 531 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 OR2G2Q8NGZ5 317 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 PFN4Q8NHR9 129 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 TSEN15Q8WW01 171 aaKnown RBP4.36□□□□□ -1.71
PTPN13-201ENST00000316707 C4orf45Q96LM5 186 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 SMAD5Q99717 465 aaKnown RBP4.36□□□□□ -1.71
PTPN13-201ENST00000316707 LMF2Q9BU23 707 aaKnown RBP4.36□□□□□ -1.71
PTPN13-201ENST00000316707 PBX4Q9BYU1 374 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 LYRM4Q9HD34 91 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 TREM2Q9NZC2 230 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 TBC1D3IA0A087WXS9 549 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 TMEM88BA6NKF7 163 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 PPM1DO15297 605 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 IL9P15248 144 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 KCNJ3P48549 501 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 RAB2AP61019 212 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 SERTAD2Q14140 314 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 GPR162Q16538 588 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 ACTBL2Q562R1 376 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 FAAP20Q6NZ36 180 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 ADGRE4PQ86SQ3 457 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 OR2L3Q8NG85 312 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 HMGB4Q8WW32 186 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 ZFPM2Q8WW38 1151 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 PTDSS2Q9BVG9 487 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 UNKLQ9H9P5 680 aaKnown RBP4.36□□□□□ -1.71
PTPN13-201ENST00000316707 PLAGL1Q9UM63 463 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 COLEC10Q9Y6Z7 277 aa4.36□□□□□ -1.71
PTPN13-201ENST00000316707 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 C2orf74A8MZ97 194 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 FGF18O76093 207 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 ZIC2O95409 532 aaPredicted RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 RENP00797 406 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 C8AP07357 584 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 PSMB5P28074 263 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 HTR2CP28335 458 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 PTGFRP43088 359 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 GSK3AP49840 483 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 CSRP2Q16527 193 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 IGSF11Q5DX21 431 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 SLC25A42Q86VD7 318 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 ZNF614Q8N883 585 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 NKAIN3Q8N8D7 197 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 LMNTD1Q8N9Z9 388 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 GCDHQ92947 438 aaPredicted RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 SGK3Q96BR1 496 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 ARMC5Q96C12 935 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 NMNAT3Q96T66 252 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 CMSS1Q9BQ75 279 aaKnown RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 G6PC3Q9BUM1 346 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 DAPP1Q9UN19 280 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 MRPS33Q9Y291 106 aaKnown RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 NUP214P35658 2090 aaPredicted RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 A0A1W2PRU2 124 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 BRINP1O60477 761 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 ADH1CP00326 375 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 ARRB1P49407 418 aaPredicted RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 F2RL1P55085 397 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 BTN3A2P78410 334 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 IL13RA1P78552 427 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 ATXN7L3Q14CW9 347 aaPredicted RBP4.35□□□□□ -1.71
PTPN13-201ENST00000316707 FAM209BQ5JX69 171 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 CBLN2Q8IUK8 224 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 MISPQ8IVT2 679 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 AMER3Q8N944 861 aa4.35□□□□□ -1.71
PTPN13-201ENST00000316707 DMBX1Q8NFW5 382 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms