RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 HELZP42694 1942 aaKnown RBP3.35□□□□□ -1.87
SMCO3-201ENST00000316048 TCF20Q9UGU0 1960 aaKnown RBP3.34□□□□□ -1.87
SMCO3-201ENST00000316048 IGLV3-16A0A075B6K0 115 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 MEX3AA1L020 520 aaKnown RBP3.34□□□□□ -1.87
SMCO3-201ENST00000316048 BBIP1A8MTZ0 92 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 KPNA3O00505 521 aaPredicted RBP3.34□□□□□ -1.87
SMCO3-201ENST00000316048 E2F3O00716 465 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 ANGPT2O15123 496 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 CFLARO15519 480 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 TSPAN2O60636 221 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 MTRF1O75570 445 aaKnown RBP3.34□□□□□ -1.87
SMCO3-201ENST00000316048 STK16O75716 305 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 FTH1P02794 183 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 MPC1LP0DKB6 136 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 DRD5P21918 477 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 HNRNPA2B1P22626 353 aaKnown RBP3.34□□□□□ -1.87
SMCO3-201ENST00000316048 ME2P23368 584 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 PTPN6P29350 595 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 HMOX2P30519 316 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 CTAG1AP78358 180 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 CDKL1Q00532 357 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 SNTB2Q13425 540 aaKnown RBP3.34□□□□□ -1.87
SMCO3-201ENST00000316048 ELAVL3Q14576 367 aaKnown RBP3.34□□□□□ -1.87
SMCO3-201ENST00000316048 RCN1Q15293 331 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 HNRNPA1L2Q32P51 320 aaKnown RBP3.34□□□□□ -1.87
SMCO3-201ENST00000316048 TMEM41BQ5BJD5 291 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 SBSNQ6UWP8 590 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 CYHR1Q6ZMK1 362 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 HSD11B1LQ7Z5J1 315 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 GCNT2Q8N0V5 402 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 FADS6Q8N9I5 356 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 ROPN1LQ96C74 230 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 RCN3Q96D15 328 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 RBM14Q96PK6 669 aaKnown RBP3.34□□□□□ -1.87
SMCO3-201ENST00000316048 HOPXQ9BPY8 73 aaPredicted RBP3.34□□□□□ -1.87
SMCO3-201ENST00000316048 KAT8Q9H7Z6 458 aaKnown RBP3.34□□□□□ -1.87
SMCO3-201ENST00000316048 PARVBQ9HBI1 364 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 ADGRL4Q9HBW9 690 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 TRPV5Q9NQA5 729 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 GID8Q9NWU2 228 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 WWOXQ9NZC7 414 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 CD84Q9UIB8 345 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 ZNF490Q9ULM2 529 aaPredicted RBP3.34□□□□□ -1.87
SMCO3-201ENST00000316048 POMPQ9Y244 141 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 NOSIPQ9Y314 301 aaKnown RBP3.34□□□□□ -1.87
SMCO3-201ENST00000316048 TIMM22Q9Y584 194 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 CENPFP49454 3210 aa3.34□□□□□ -1.87
SMCO3-201ENST00000316048 PCNTO95613 3336 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 CLDN9O95484 217 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 CAPN1P07384 714 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 CTSLP07711 333 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 PSMC3P17980 439 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 CCR7P32248 378 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 CA5AP35218 305 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 VHLP40337 213 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 METAP1P53582 386 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 FOXA1P55317 472 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 AP1S2P56377 157 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 PSME3P61289 254 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 ERVK-8P63133 956 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 RUNX3Q13761 415 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 EXOSC2Q13868 293 aaKnown RBP3.34□□□□□ -1.88
SMCO3-201ENST00000316048 KIAA0141Q14154 515 aaPredicted RBP3.34□□□□□ -1.88
SMCO3-201ENST00000316048 PPP1R3AQ16821 1122 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 ECSCRQ19T08 205 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 ZFP69Q49AA0 526 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 ATP6AP1LQ52LC2 224 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 FBXO48Q5FWF7 155 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 WDR25Q64LD2 544 aaPredicted RBP3.34□□□□□ -1.88
SMCO3-201ENST00000316048 ASPHD2Q6ICH7 369 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 ZFP1Q6P2D0 407 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 PNCKQ6P2M8 343 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 PRMT9Q6P2P2 845 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 HACD2Q6Y1H2 254 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 TMEM184AQ6ZMB5 413 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 ADAMTSL5Q6ZMM2 481 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 ZNF841Q6ZN19 808 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 GOLGA7Q7Z5G4 137 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 HPS6Q86YV9 775 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 GVQW1Q8N7I0 195 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 OR4F6Q8NGB9 312 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 SSC4DQ8WTU2 575 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 ELMO1Q92556 727 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 C11orf52Q96A22 123 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 TMEM159Q96B96 161 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 PPP3R2Q96LZ3 170 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 FOPNLQ96NB1 174 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 RCHY1Q96PM5 261 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 VPS35Q96QK1 796 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 KCNA7Q96RP8 456 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 NPAS2Q99743 824 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 APOOQ9BUR5 198 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 RIOK2Q9BVS4 552 aaKnown RBP3.34□□□□□ -1.88
SMCO3-201ENST00000316048 TPPP3Q9BW30 176 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 MRPL13Q9BYD1 178 aaKnown RBP3.34□□□□□ -1.88
SMCO3-201ENST00000316048 VCX3BQ9H321 246 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 TUBB1Q9H4B7 451 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 TAS2R16Q9NYV7 291 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 ADA2Q9NZK5 511 aa3.34□□□□□ -1.88
SMCO3-201ENST00000316048 EIF3KQ9UBQ5 218 aaKnown RBP3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms