RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 PIN1Q13526 163 aaPredicted RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 NFE2L1Q14494 772 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 ZIC1Q15915 447 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 SYPL1Q16563 259 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 PGGHGQ32M88 737 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 PLA1AQ53H76 456 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 ZNF311Q5JNZ3 666 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 LCE1AQ5T7P2 110 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 METRNLQ641Q3 311 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 HBMQ6B0K9 141 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 CDC73Q6P1J9 531 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 PAQR6Q6TCH4 344 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 ZNF322Q6U7Q0 402 aaPredicted RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 TMEM107Q6UX40 140 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 PAMR1Q6UXH9 720 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 RRM2BQ7LG56 351 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 ADCK2Q7Z695 626 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 LRRTM4Q86VH4 590 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 AMZ2Q86W34 360 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 KIF18BQ86Y91 864 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 RBM45Q8IUH3 476 aaKnown RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 GPALPP1Q8IXQ4 340 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 RNF113BQ8IZP6 322 aaKnown RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 BCL6BQ8N143 479 aaPredicted RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 FAM109AQ8N4B1 249 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 IQCF1Q8N6M8 205 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 ATP6V1C2Q8NEY4 427 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 OR6T1Q8NGN1 323 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 OR5M3Q8NGP4 307 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 OR1L3Q8NH93 324 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 NEIL3Q8TAT5 605 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 SLC2A12Q8TD20 617 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 BRIX1Q8TDN6 353 aaKnown RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 XAGE5Q8WWM1 108 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 DEDD2Q8WXF8 326 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 ACOT11Q8WXI4 607 aaPredicted RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 PHYHIPQ92561 330 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 AKAP1Q92667 903 aaKnown RBP eCLIP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 TFGQ92734 400 aaPredicted RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 RAB8BQ92930 207 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 MR1Q95460 341 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 ZDHHC12Q96GR4 267 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 LRFN5Q96NI6 719 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 FCRL4Q96PJ5 515 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 FYTTD1Q96QD9 318 aaKnown RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 OR2M2Q96R28 347 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 BBS4Q96RK4 519 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 ZNF649Q9BS31 505 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 TTYH2Q9BSA4 534 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 DPH7Q9BTV6 452 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 PIGUQ9H490 435 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 MTHFD2LQ9H903 347 aaPredicted RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 ZCCHC3Q9NUD5 404 aaKnown RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 POT1Q9NUX5 634 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 LYARQ9NX58 379 aaKnown RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 BABAM2Q9NXR7 383 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 STMN3Q9NZ72 180 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 H2AFY2Q9P0M6 372 aaPredicted RBP4.43□□□□□ -1.7
CKS1B-201ENST00000308987 COMMD3Q9UBI1 195 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 SLC13A4Q9UKG4 626 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 RARRES3Q9UL19 164 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 ING4Q9UNL4 249 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 ASF1AQ9Y294 204 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 COX11Q9Y6N1 276 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 ABCA4P78363 2273 aa4.43□□□□□ -1.7
CKS1B-201ENST00000308987 NINQ8N4C6 2090 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 TRAV1-2A0A0B4J238 106 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 A0A1B0GVI7 797 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 A0A1W2PPV9 198 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 LINC00862A6NCI5 91 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 LRIT2A6NDA9 550 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 ANKUB1A6NFN9 424 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 TLCD2A6NGC4 264 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 TUBAL3A6NHL2 446 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 SLC9B1P1A6NJY1 282 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 M0R3H8 397 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 GTPBP1O00178 669 aaKnown RBP4.42□□□□□ -1.7
CKS1B-201ENST00000308987 CTDSPLO15194 276 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 TMPRSS11DO60235 418 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 HPGDSO60760 199 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 FMO6PO60774 539 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 NOS1APO75052 506 aaPredicted RBP4.42□□□□□ -1.7
CKS1B-201ENST00000308987 SCRG1O75711 98 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 OR2B3O76000 313 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 TPPPO94811 219 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 EPPINO95925 133 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 SERPINA3P01011 423 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 HMGN2P05204 90 aaKnown RBP4.42□□□□□ -1.7
CKS1B-201ENST00000308987 SERPIND1P05546 499 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 CHRM4P08173 479 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 GUSBP08236 651 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 RAB40ALP0C0E4 278 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 VSIG10L2P0DP72 767 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 PSKH1P11801 424 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 ST6GAL1P15907 406 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 CELP19835 753 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 NPR2P20594 1047 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 SDHAP31040 664 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 MPIP34949 423 aa4.42□□□□□ -1.7
CKS1B-201ENST00000308987 SSR2P43308 183 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms