RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 CACYBPQ9HB71 228 aaKnown RBP9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 FREM2Q5SZK8 3169 aa9.42□□□□□ -0.9
APOBEC3F-201ENST00000308521 ADAMTS9Q9P2N4 1935 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 A0A1B0GWJ7 208 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 PLSCR5A0PG75 271 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 ZNF729A6NN14 1252 aaPredicted RBP9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 FCMRO60667 390 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 CLN5O75503 358 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 GATBO75879 557 aaKnown RBP9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 APOC3P02656 99 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 GLAP06280 429 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 GIPP09681 153 aaPredicted RBP9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 UCHL1P09936 223 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 CPN1P15169 458 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 HOXA6P31267 233 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 TLX1P31314 330 aaPredicted RBP9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 ACVR1BP36896 505 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 OR12D2P58182 307 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 RNASE12Q5GAN4 147 aaKnown RBP9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 TCTE1Q5JU00 501 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 PMS2CLQ68D20 193 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 ZNF836Q6ZNA1 936 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 RANBP3LQ86VV4 465 aaPredicted RBP9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 TMEM17Q86X19 198 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 C1orf210Q8IVY1 113 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 SKA3Q8IX90 412 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 CA13Q8N1Q1 262 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 OR11G2Q8NGC1 345 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 OR4D9Q8NGE8 314 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 NANPQ8TBE9 248 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 SMPDL3BQ92485 455 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 MRPS24Q96EL2 167 aaKnown RBP9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 PEX11GQ96HA9 241 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 IFT27Q9BW83 186 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 HRASLSQ9HDD0 168 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 MED11Q9P086 117 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 SLC35A3Q9Y2D2 325 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 TMEM184BQ9Y519 407 aaPredicted RBP9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 TP53BP1Q12888 1972 aaPredicted RBP9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 CPED1A4D0V7 1026 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 LYPD3O95274 346 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 CBX7O95931 251 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 LPLP06858 475 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 THBS1P07996 1170 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 ACAA1P09110 424 aaPredicted RBP9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 MAKP20794 623 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 AP3S2P59780 193 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 EIF2S3LQ2VIR3 472 aaKnown RBP9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 ARHGAP11BQ3KRB8 267 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 RNF212Q495C1 297 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 SLC6A19Q695T7 634 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 Q6ZTK2 550 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 TMPRSS11FQ6ZWK6 438 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 PCNPQ8WW12 178 aaKnown RBP9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 PHYHIPQ92561 330 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 UTP23Q9BRU9 249 aaKnown RBP9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 ENKD1Q9H0I2 346 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 UFSP2Q9NUQ7 469 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 PIPOXQ9P0Z9 390 aa9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 ATXN7L1Q9ULK2 861 aaPredicted RBP9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 PPIEQ9UNP9 301 aaKnown RBP9.41□□□□□ -0.9
APOBEC3F-201ENST00000308521 IGHV1OR21-1A0A087WYE8 117 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 LILRA5A6NI73 299 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 CYR61O00622 381 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 FOXS1O43638 330 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 NDUFS6O75380 124 aaKnown RBP9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 EIF3GO75821 320 aaKnown RBP eCLIP9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 TFP02787 698 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 DRD5P21918 477 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 ARRB1P49407 418 aaPredicted RBP9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 DUSP8Q13202 625 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 ZSWIM7Q19AV6 140 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 HLA-BQ31612 363 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 ANKRD39Q53RE8 183 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 MFSD12Q6NUT3 480 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 UQCC3Q6UW78 93 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 UNQ9370/PRO34162Q6UXP9 181 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 DGAT2L6Q6ZPD8 337 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 LRRC25Q8N386 305 aaPredicted RBP9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 TMEM105Q8N8V8 129 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 SLC16A11Q8NCK7 471 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 OR5J2Q8NH18 312 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 GLYATL2Q8WU03 294 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 TMEM239Q8WW34 195 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 NARS2Q96I59 477 aaKnown RBP9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 DCBLD2Q96PD2 775 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 DDOQ99489 341 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 NUDT22Q9BRQ3 303 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 EVA1AQ9H8M9 152 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 ADAP2Q9NPF8 381 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 FAM74A7A6NL05 159 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 RIIAD1A6NNX1 92 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 GABARAPH6UMI1 98 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 RLN2P04090 185 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 ATP1B1P05026 303 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 IL5P05113 134 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 TDGF1P13385 188 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 PRG2P13727 222 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 IFNGR1P15260 489 aa9.4□□□□□ -0.9
APOBEC3F-201ENST00000308521 ZNF10P21506 573 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms