RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 SLC29A1Q99808 456 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 CLMPQ9H6B4 373 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 KIR3DX1Q9H7L2 352 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 PLCXD1Q9NUJ7 323 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 CRYBG1Q9Y4K1 1723 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 A1L4Q6 167 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 METTL15A6NJ78 407 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 ARHGAP33O14559 1287 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 MEOX1P50221 254 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 DNAJC5GQ8N7S2 189 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 SLC39A7Q92504 469 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 POTEKPQ9BYX7 375 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 A0A0B4J2A0 478 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 hCG_1809904A0A1W2PP81 198 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 A0A1W2PPE2 198 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 A0A1W2PR64 198 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 STMND1H3BQB6 276 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 I6L893 689 aaPredicted RBP7.16□□□□□ -1.26
SCN9A-201ENST00000303354 J3KRW8 73 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 FURINP09958 794 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 KITLGP21583 273 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF766Q5HY98 468 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 ATPAF1Q5TC12 328 aaPredicted RBP7.16□□□□□ -1.26
SCN9A-201ENST00000303354 RELL1Q8IUW5 271 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 RDH5Q92781 318 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 SORCS2Q96PQ0 1159 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 SHPKQ9UHJ6 478 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF705FA8MVS1 300 aaPredicted RBP7.16□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF705DP0CH99 300 aaPredicted RBP7.16□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF705BP0CI00 300 aaPredicted RBP7.16□□□□□ -1.26
SCN9A-201ENST00000303354 FOLR1P15328 257 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 PPP1CAP62136 330 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 RPP30P78346 268 aaKnown RBP7.16□□□□□ -1.26
SCN9A-201ENST00000303354 CLDN10P78369 228 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 ARL16Q0P5N6 197 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 HENMT1Q5T8I9 393 aaKnown RBP7.16□□□□□ -1.26
SCN9A-201ENST00000303354 APOOLQ6UXV4 268 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 Q6ZTK2 550 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 GDF7Q7Z4P5 450 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 BPIFB2Q8N4F0 458 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 OR2Z1Q8NG97 314 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 OR1J2Q8NGS2 313 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 OR1J1Q8NGS3 322 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 TCTEX1D2Q8WW35 142 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 TAAR9Q96RI9 348 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 ATOH8Q96SQ7 321 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 SORT1Q99523 831 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 TSNAXQ99598 290 aaKnown RBP7.16□□□□□ -1.26
SCN9A-201ENST00000303354 AMBRA1Q9C0C7 1298 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 TBCCD1Q9NVR7 557 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 ENPP5Q9UJA9 477 aa7.16□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF346Q9UL40 294 aaKnown RBP7.16□□□□□ -1.26
SCN9A-201ENST00000303354 LYZL6O75951 148 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 TSPAN15O95858 294 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 APOC3P02656 99 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 KIR2DL3P43628 341 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 P2RX1P51575 399 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 DPY19L2P1Q6NXN4 242 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 CHDHQ8NE62 594 aaPredicted RBP7.15□□□□□ -1.26
SCN9A-201ENST00000303354 NT5C3BQ969T7 300 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 SGK3Q96BR1 496 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 ZBTB8AQ96BR9 441 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 SLC35A4Q96G79 324 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 SLC46A1Q96NT5 459 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 MAGIXQ9H6Y5 334 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF286AQ9HBT8 521 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 MRPS34P82930 218 aaKnown RBP7.15□□□□□ -1.26
SCN9A-201ENST00000303354 EGFL6Q8IUX8 553 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 FBXL14Q8N1E6 418 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 SCML4Q8N228 414 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 BRIX1Q8TDN6 353 aaKnown RBP7.15□□□□□ -1.26
SCN9A-201ENST00000303354 ACOT11Q8WXI4 607 aaPredicted RBP7.15□□□□□ -1.26
SCN9A-201ENST00000303354 ISL2Q96A47 359 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 NICN1Q9BSH3 213 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 LHX6Q9UPM6 363 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 SLC22A20A6NK97 555 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 DEFB108AA8MXU0 73 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 DLL1O00548 723 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 LY86O95711 162 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 HTN1P15515 57 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 TAS2R20P59543 309 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 IL10RAQ13651 578 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 PDLIM3Q53GG5 364 aaPredicted RBP7.15□□□□□ -1.26
SCN9A-201ENST00000303354 PACRGLQ8N7B6 248 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 PAQR5Q9NXK6 330 aaPredicted RBP7.15□□□□□ -1.26
SCN9A-201ENST00000303354 GPR45Q9Y5Y3 372 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 LRIT2A6NDA9 550 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 F5H5P2 479 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 SDHBP21912 280 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 OPRD1P41143 372 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 HSD17B7P56937 341 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 TEKQ02763 1124 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 CLINT1Q14677 625 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 C1orf140Q5VVS0 124 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 METRNLQ641Q3 311 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 TMEM163Q8TC26 289 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 NIPSNAP1Q9BPW8 284 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 PTTG2Q9NZH5 202 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 UBQLN2Q9UHD9 624 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 PGAP2Q9UHJ9 254 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms