RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 ZNF724A8MTY0 619 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 SCRG1O75711 98 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 ITGAMP11215 1152 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 PVRP15151 417 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 USF1P22415 310 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-201ENST00000302528 HTR4Q13639 388 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 OR2G6Q5TZ20 316 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF425Q6IV72 752 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 C19orf35Q6ZS72 473 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 LRRC56Q8IYG6 542 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-201ENST00000302528 PNPLA1Q8N8W4 532 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 TINAGL1Q9GZM7 467 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-201ENST00000302528 CTDSP1Q9GZU7 261 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 IGSF5Q9NSI5 407 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-201ENST00000302528 TMEM235A6NFC5 223 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 RRP8O43159 456 aaKnown RBP9.62□□□□□ -0.87
CLIP1-201ENST00000302528 CIDEAO60543 219 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 TPOP07202 933 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 TIGITQ495A1 244 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 STEAP1BQ6NZ63 245 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 PIGTQ969N2 578 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 SRRQ9GZT4 340 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 TWSG1Q9GZX9 223 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 CBY1Q9Y3M2 126 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF701M0R085 212 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-201ENST00000302528 GPR75O95800 540 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 TRAPPC2P0DI81 140 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 TRAPPC2BP0DI82 140 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 NAGAP17050 411 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 EMX1Q04741 257 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-201ENST00000302528 LINC00696Q6ZRV3 163 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 SLC51BQ86UW2 128 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 CPEB3Q8NE35 698 aaKnown RBP9.62□□□□□ -0.87
CLIP1-201ENST00000302528 OR10J5Q8NHC4 309 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 TMEM106AQ96A25 262 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 KCTD12Q96CX2 325 aaKnown RBP9.62□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF778Q96MU6 729 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 ALG12Q9BV10 488 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 SDR39U1Q9NRG7 319 aaPredicted RBP9.62□□□□□ -0.87
CLIP1-201ENST00000302528 P4HTMQ9NXG6 502 aa9.62□□□□□ -0.87
CLIP1-201ENST00000302528 M0QYG6 137 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF93P35789 620 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-201ENST00000302528 RAD52P43351 418 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF133P52736 654 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-201ENST00000302528 SLC10A2Q12908 348 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-201ENST00000302528 PM20D1Q6GTS8 502 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 C5orf46Q6UWT4 87 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 MRPL10Q7Z7H8 261 aaKnown RBP9.61□□□□□ -0.87
CLIP1-201ENST00000302528 B3GNT8Q7Z7M8 397 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 EID2Q8N6I1 236 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 NECAP1Q8NC96 275 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 OR51H1Q8NH63 302 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 MARC2Q969Z3 335 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 CCDC74AQ96AQ1 378 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 MUTYHQ9UIF7 546 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 FAM96BQ9Y3D0 163 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 C5P01031 1676 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 H2AFB1P0C5Y9 115 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 SPP1P10451 314 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 MRPL19P49406 292 aaKnown RBP9.61□□□□□ -0.87
CLIP1-201ENST00000302528 BAMBIQ13145 260 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 PCK2Q16822 640 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 MRPL2Q5T653 305 aaKnown RBP9.61□□□□□ -0.87
CLIP1-201ENST00000302528 TMEM182Q6ZP80 229 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-201ENST00000302528 ADIPOR2Q86V24 386 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 TMEM178AQ8NBL3 297 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 AGBL5Q8NDL9 886 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 OR51A2Q8NGJ7 313 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 CD200R1Q8TD46 325 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 TIMM29Q9BSF4 260 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 TAF9BQ9HBM6 251 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 UFSP2Q9NUQ7 469 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 CD207Q9UJ71 328 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 SCN11AQ9UI33 1791 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 NPIPB15A6NHN6 443 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-201ENST00000302528 G3V3Y1 287 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 BCAT2O15382 392 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-201ENST00000302528 RPE65Q16518 533 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 Q499Y3 187 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 OR2AE1Q8NHA4 323 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 PIGQQ9BRB3 760 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 SLC22A11Q9NSA0 550 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 KPTNQ9Y664 436 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 PLIN4Q96Q06 1357 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 IGKV6D-41A0A0C4DH26 115 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 CTDSP2O14595 271 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 OR2C1O95371 312 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 PTBP3O95758 552 aaKnown RBP9.61□□□□□ -0.87
CLIP1-201ENST00000302528 HIST1H1TP22492 207 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-201ENST00000302528 C21orf33P30042 268 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-201ENST00000302528 GABRA5P31644 462 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 NPY4RP50391 375 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 HNRNPA3P51991 378 aaKnown RBP9.61□□□□□ -0.87
CLIP1-201ENST00000302528 FRMPD2BQ6IN97 320 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 C17orf107Q6ZR85 190 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 OR10X1Q8NGY0 326 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 ZNF596Q8TC21 504 aa9.61□□□□□ -0.87
CLIP1-201ENST00000302528 DVL3Q92997 716 aaPredicted RBP9.61□□□□□ -0.87
CLIP1-201ENST00000302528 ARRDC3Q96B67 414 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms