RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 SIDT1Q9NXL6 827 aaKnown RBP13.18□□□□□ -0.3
CDT1-201ENST00000301019 NAP1L6A6NFF2 107 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 PHOX2AO14813 284 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 LRP3O75074 770 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 ZFPL1O95159 310 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 FGF19O95750 216 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 FGBP02675 491 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 MC3RP41968 323 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 ID2Q02363 134 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 PDE7AQ13946 482 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 INPP5JQ15735 1006 aaPredicted RBP13.17□□□□□ -0.3
CDT1-201ENST00000301019 OR5P2Q8WZ92 322 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 GPR61Q9BZJ8 451 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 ATG5Q9H1Y0 275 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 GFOD1Q9NXC2 390 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 ST6GALNAC2Q9UJ37 374 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 ZNF223Q9UK11 482 aaPredicted RBP13.17□□□□□ -0.3
CDT1-201ENST00000301019 ZDHHC8Q9ULC8 765 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 DMRT1Q9Y5R6 373 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 MYO16Q9Y6X6 1858 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 SCN8AQ9UQD0 1980 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 RIIAD1A6NNX1 92 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 NEDD8-MDP1E9PL57 170 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 OR10H2O60403 315 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 ZNF432O94892 652 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 IL5P05113 134 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 OR13C7P0DN81 318 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 MDKP21741 143 aaPredicted RBP13.17□□□□□ -0.3
CDT1-201ENST00000301019 FAUP35544 74 aaKnown RBP13.17□□□□□ -0.3
CDT1-201ENST00000301019 PDX1P52945 283 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 PSMD4P55036 377 aaKnown RBP13.17□□□□□ -0.3
CDT1-201ENST00000301019 ARHGAP40Q5TG30 622 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 STEAP1BQ6NZ63 245 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 ZNF529Q6P280 563 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 HSD11B1LQ7Z5J1 315 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 DMBX1Q8NFW5 382 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 DIO2Q92813 273 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 ZBTB8AQ96BR9 441 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 HS6ST2Q96MM7 605 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 TNFRSF13CQ96RJ3 184 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 TREM2Q9NZC2 230 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 TDRD15B5MCY1 1934 aaKnown RBP13.17□□□□□ -0.3
CDT1-201ENST00000301019 C7orf77A4D0Y5 90 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 UNC119BA6NIH7 251 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 ZNF727A8MUV8 499 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 AP4M1O00189 453 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 KIAA0355O15063 1070 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 SLC31A2O15432 143 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 RAB3DO95716 219 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 SERPINA4P29622 427 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 LSSP48449 732 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 CDK5R1Q15078 307 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 TMEM44Q2T9K0 475 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 ACOT7LQ6ZUV0 252 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 Q6ZVU0 165 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 ZNF511Q8NB15 262 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 EDEM2Q9BV94 578 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 NCDNQ9UBB6 729 aa13.17□□□□□ -0.3
CDT1-201ENST00000301019 TRAV8-7A0A075B6U6 113 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 MBTPS2O43462 519 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 OR1F1O43749 312 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 RPLP2P05387 115 aaKnown RBP13.16□□□□□ -0.3
CDT1-201ENST00000301019 ADRA2CP18825 462 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 RAB5AP20339 215 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 AK4P27144 223 aaPredicted RBP13.16□□□□□ -0.3
CDT1-201ENST00000301019 CACUL1Q86Y37 369 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 RASGEF1AQ8N9B8 481 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 OR4K14Q8NGD5 310 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 RRNAD1Q96FB5 475 aaKnown RBP13.16□□□□□ -0.3
CDT1-201ENST00000301019 EIF5A2Q9GZV4 153 aaKnown RBP13.16□□□□□ -0.3
CDT1-201ENST00000301019 IKZF2Q9UKS7 526 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 PUS1Q9Y606 427 aaKnown RBP eCLIP13.16□□□□□ -0.3
CDT1-201ENST00000301019 A0A1W2PQ45 241 aaPredicted RBP13.16□□□□□ -0.3
CDT1-201ENST00000301019 A0A1W2PQY0 241 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 SLC34A2O95436 690 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 TBX6O95947 436 aaPredicted RBP13.16□□□□□ -0.3
CDT1-201ENST00000301019 COX5BP10606 129 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 SSR2P43308 183 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 LPAR6P43657 344 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 ACSM1Q08AH1 577 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 LCTLQ6UWM7 567 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 CD300LDQ6UXZ3 194 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 HIST2H3AQ71DI3 136 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 GID4Q8IVV7 300 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 PLPP7Q8NBV4 271 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 SOX7Q9BT81 388 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 TMPRSS5Q9H3S3 457 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 TMEM27Q9HBJ8 222 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 SPACA1Q9HBV2 294 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 MYO9BQ13459 2157 aa13.16□□□□□ -0.3
CDT1-201ENST00000301019 NME2P1O60361 137 aa13.15□□□□□ -0.3
CDT1-201ENST00000301019 IGLV3-27P01718 113 aa13.15□□□□□ -0.3
CDT1-201ENST00000301019 OR8U9P0C7N5 309 aa13.15□□□□□ -0.3
CDT1-201ENST00000301019 FABP4P15090 132 aa13.15□□□□□ -0.3
CDT1-201ENST00000301019 CERS1P27544 350 aa13.15□□□□□ -0.3
CDT1-201ENST00000301019 AGTR1P30556 359 aa13.15□□□□□ -0.3
CDT1-201ENST00000301019 ACTR1BP42025 376 aa13.15□□□□□ -0.3
CDT1-201ENST00000301019 EPHB3P54753 998 aa13.15□□□□□ -0.3
CDT1-201ENST00000301019 S100A10P60903 97 aa13.15□□□□□ -0.3
CDT1-201ENST00000301019 ZNF616Q08AN1 781 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms