RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 LINC01565O15544 149 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 SEMG1P04279 462 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 CFIP05156 583 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 ACHEP22303 614 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 FGF9P31371 208 aaPredicted RBP12.17□□□□□ -0.46
CASC4-201ENST00000299957 CLRN1P58418 232 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 MC2RQ01718 297 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 ALKBH1Q13686 389 aaKnown RBP12.17□□□□□ -0.46
CASC4-201ENST00000299957 BCL2A1Q16548 175 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 DUSP6Q16828 381 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 YIF1BQ5BJH7 314 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 ZBTB37Q5TC79 503 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 CBLN3Q6UW01 205 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 MYADMQ96S97 322 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 MS4A7Q9GZW8 240 aaPredicted RBP12.17□□□□□ -0.46
CASC4-201ENST00000299957 CHD5Q8TDI0 1954 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 SCN10AQ9Y5Y9 1956 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 SBF1O95248 1867 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 IGKV1-8A0A0C4DH67 115 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 A0A1W2PPV9 198 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 TCRBV16S1A1N1A0A5B0 115 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 ARRDC5A6NEK1 342 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 RBMXL2O75526 392 aaKnown RBP12.17□□□□□ -0.46
CASC4-201ENST00000299957 TRAPPC6AO75865 159 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 PGCP20142 388 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 DUSP8Q13202 625 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 CAMK2DQ13557 499 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 HNF4GQ14541 408 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 ABCA11PQ4W5N1 156 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 CD276Q5ZPR3 534 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 STEAP1BQ6NZ63 245 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 C3orf33Q6P1S2 294 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 ZNF704Q6ZNC4 412 aaPredicted RBP12.17□□□□□ -0.46
CASC4-201ENST00000299957 Q6ZTK2 550 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 NLRC3Q7RTR2 1065 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 OR4S1Q8NGB4 309 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 OR11H7Q8NGC8 314 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 FAM3DQ96BQ1 224 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 SMIM19Q96E16 107 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 WDFY2Q96P53 400 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 PLA2G2FQ9BZM2 168 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 GDE1Q9NZC3 331 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 SERTAD3Q9UJW9 196 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 WRBO00258 174 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 ADRB1P08588 477 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 PVALBP20472 110 aaPredicted RBP12.17□□□□□ -0.46
CASC4-201ENST00000299957 ENDOUP21128 410 aaKnown RBP12.17□□□□□ -0.46
CASC4-201ENST00000299957 RAP2BP61225 183 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 TNK1Q13470 666 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 ARTNQ5T4W7 220 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 WDR88Q6ZMY6 472 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 OR10AC1Q8NH08 325 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 SDHAF2Q9NX18 166 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 SLC22A7Q9Y694 548 aa12.17□□□□□ -0.46
CASC4-201ENST00000299957 TSPAN11A1L157 253 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 S100A11P31949 105 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 CSNK1EP49674 416 aaKnown RBP12.16□□□□□ -0.46
CASC4-201ENST00000299957 PER3P56645 1201 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 ACTBP60709 375 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 ACTG1P63261 375 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 ESPL1Q14674 2120 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 EOGTQ5NDL2 527 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 PRAMEF20Q5VT98 475 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 TMEM156Q8N614 296 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 MARVELD1Q9BSK0 173 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 BANF2Q9H503 90 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 LSM2Q9Y333 95 aaKnown RBP12.16□□□□□ -0.46
CASC4-201ENST00000299957 B3GALT1Q9Y5Z6 326 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 PDCD11Q14690 1871 aaKnown RBP12.16□□□□□ -0.46
CASC4-201ENST00000299957 SSX5O60225 188 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 TRAPPC2P0DI81 140 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 TRAPPC2BP0DI82 140 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 DHPSP49366 369 aaPredicted RBP12.16□□□□□ -0.46
CASC4-201ENST00000299957 TPMTP51580 245 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 GFERP55789 205 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 GLO1Q04760 184 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 FUT5Q11128 374 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 TMEM201Q5SNT2 666 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 C1QL3Q5VWW1 255 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 ZNF585AQ6P3V2 769 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 TMEM52Q8NDY8 209 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 C15orf40Q8WUR7 153 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 NUDCD2Q8WVJ2 157 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 PITHD1Q9GZP4 211 aaPredicted RBP12.16□□□□□ -0.46
CASC4-201ENST00000299957 FAM60AQ9NP50 221 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 DUSP22Q9NRW4 184 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 LSM5Q9Y4Y9 91 aaKnown RBP12.16□□□□□ -0.46
CASC4-201ENST00000299957 HEATR5BQ9P2D3 2071 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 TMIGD3P0DMS9 266 aaPredicted RBP12.16□□□□□ -0.46
CASC4-201ENST00000299957 DOC2BQ14184 412 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 ZNF169Q14929 603 aaPredicted RBP12.16□□□□□ -0.46
CASC4-201ENST00000299957 RBMS2Q15434 407 aaKnown RBP12.16□□□□□ -0.46
CASC4-201ENST00000299957 DAZLQ92904 295 aaKnown RBP12.16□□□□□ -0.46
CASC4-201ENST00000299957 FGGYQ96C11 551 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 WDR89Q96FK6 387 aaPredicted RBP12.16□□□□□ -0.46
CASC4-201ENST00000299957 MED30Q96HR3 178 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 LINC00615Q96LM1 132 aaPredicted RBP12.16□□□□□ -0.46
CASC4-201ENST00000299957 OR5B2Q96R09 309 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 EMC7Q9NPA0 242 aa12.16□□□□□ -0.46
CASC4-201ENST00000299957 B3GNT2Q9NY97 397 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms