RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 RAB6AP20340 208 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 CD80P33681 288 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 ELAVL3Q14576 367 aaKnown RBP13.6□□□□□ -0.23
SPIDR-201ENST00000297423 EXOSC7Q15024 291 aaKnown RBP13.6□□□□□ -0.23
SPIDR-201ENST00000297423 HNRNPA1L2Q32P51 320 aaKnown RBP13.6□□□□□ -0.23
SPIDR-201ENST00000297423 ALG10BQ5I7T1 473 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 SLC25A30Q5SVS4 291 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 MCATQ8IVS2 390 aaKnown RBP13.6□□□□□ -0.23
SPIDR-201ENST00000297423 CXorf40AQ8TE69 158 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 TGIF2Q9GZN2 237 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 C2orf42Q9NWW7 574 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 ASH2LQ9UBL3 628 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 LDB3O75112 727 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 MAP3K8P41279 467 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 PGDP52209 483 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 IL13RA1P78552 427 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 ITPRIPL2Q3MIP1 535 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 LEG1Q6P5S2 330 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 ZNF793Q6ZN11 406 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 ETV3LQ6ZN32 361 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 BPIFB2Q8N4F0 458 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 PHOSPHO1Q8TCT1 267 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 MRGPRX3Q96LB0 322 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 BCL2L14Q9BZR8 327 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 NCDNQ9UBB6 729 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 FOXJ3Q9UPW0 622 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 ICKQ9UPZ9 632 aa13.6□□□□□ -0.23
SPIDR-201ENST00000297423 DUXAA6NLW8 204 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 MGMTP16455 207 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 FUT5Q11128 374 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 PABPC1L2AQ5JQF8 200 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 ENPP7Q6UWV6 458 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 ZNF600Q6ZNG1 722 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 ETFBKMTQ8IXQ9 262 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 OR4S1Q8NGB4 309 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 MOAP1Q96BY2 351 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 ACTRT3Q9BYD9 372 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 COMMD4Q9H0A8 199 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 HEATR5BQ9P2D3 2071 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 EPOPA6NHQ4 379 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 ZNF208O43345 1280 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 OR4E1P0C645 316 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 GJA4P35212 333 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 HAAOP46952 286 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 SNRPNP63162 240 aaKnown RBP13.59□□□□□ -0.23
SPIDR-201ENST00000297423 Q96M85 177 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 POTEKPQ9BYX7 375 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 APMAPQ9HDC9 416 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 CMC2Q9NRP2 79 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 ZNF281Q9Y2X9 895 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 A0A0D9SG52 128 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 ZFPL1O95159 310 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 PCBP4P57723 403 aaKnown RBP13.59□□□□□ -0.23
SPIDR-201ENST00000297423 ACTA2P62736 377 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 ACTG2P63267 376 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 SRSF3P84103 164 aaKnown RBP13.59□□□□□ -0.23
SPIDR-201ENST00000297423 HYAL1Q12794 435 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 TMEM205Q6UW68 189 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 VITQ6UXI7 678 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 PARS2Q7L3T8 475 aaKnown RBP13.59□□□□□ -0.23
SPIDR-201ENST00000297423 NAXDQ8IW45 347 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 WDSUB1Q8N9V3 476 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 TEX19Q8NA77 164 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 PGLYRP3Q96LB9 341 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 FAM83CQ9BQN1 747 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 SELENOIQ9C0D9 397 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 SYNDIG1Q9H7V2 258 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 METTL8Q9H825 291 aaKnown RBP13.59□□□□□ -0.23
SPIDR-201ENST00000297423 MTHFD2LQ9H903 347 aaPredicted RBP13.59□□□□□ -0.23
SPIDR-201ENST00000297423 GHRLQ9UBU3 117 aa13.59□□□□□ -0.23
SPIDR-201ENST00000297423 ANKRD20A5PA0PJZ0 165 aa13.58□□□□□ -0.23
SPIDR-201ENST00000297423 SNRPGP15A8MWD9 76 aa13.58□□□□□ -0.23
SPIDR-201ENST00000297423 PRKNO60260 465 aaPredicted RBP13.58□□□□□ -0.23
SPIDR-201ENST00000297423 ZNF254O75437 659 aa13.58□□□□□ -0.23
SPIDR-201ENST00000297423 PAPLNO95428 1278 aa13.58□□□□□ -0.23
SPIDR-201ENST00000297423 PGAM2P15259 253 aa13.58□□□□□ -0.23
SPIDR-201ENST00000297423 RFC3P40938 356 aa13.58□□□□□ -0.23
SPIDR-201ENST00000297423 NCMAPQ5T1S8 102 aa13.58□□□□□ -0.23
SPIDR-201ENST00000297423 RPL22L1Q6P5R6 122 aaKnown RBP13.58□□□□□ -0.23
SPIDR-201ENST00000297423 SLC25A38Q96DW6 304 aa13.58□□□□□ -0.23
SPIDR-201ENST00000297423 AHCYL2Q96HN2 611 aaKnown RBP13.58□□□□□ -0.23
SPIDR-201ENST00000297423 MYADMQ96S97 322 aa13.58□□□□□ -0.23
SPIDR-201ENST00000297423 SGPP1Q9BX95 441 aa13.58□□□□□ -0.23
SPIDR-201ENST00000297423 LAMP5Q9UJQ1 280 aa13.58□□□□□ -0.23
SPIDR-201ENST00000297423 OR1A2Q9Y585 309 aa13.58□□□□□ -0.23
SPIDR-201ENST00000297423 SERTM1A2A2V5 107 aa13.58□□□□□ -0.24
SPIDR-201ENST00000297423 POU3F4P49335 361 aa13.58□□□□□ -0.24
SPIDR-201ENST00000297423 DUSP5Q16690 384 aa13.58□□□□□ -0.24
SPIDR-201ENST00000297423 DMKNQ6E0U4 476 aaPredicted RBP13.58□□□□□ -0.24
SPIDR-201ENST00000297423 ACBD4Q8NC06 268 aa13.58□□□□□ -0.24
SPIDR-201ENST00000297423 ELP5Q8TE02 316 aa13.58□□□□□ -0.24
SPIDR-201ENST00000297423 C19orf43Q9BQ61 176 aa13.58□□□□□ -0.24
SPIDR-201ENST00000297423 WDR13Q9H1Z4 485 aa13.58□□□□□ -0.24
SPIDR-201ENST00000297423 PPIL1Q9Y3C6 166 aa13.58□□□□□ -0.24
SPIDR-201ENST00000297423 ZNF337Q9Y3M9 751 aa13.58□□□□□ -0.24
SPIDR-201ENST00000297423 SFTPBP07988 381 aa13.58□□□□□ -0.24
SPIDR-201ENST00000297423 HIST1H1TP22492 207 aaPredicted RBP13.58□□□□□ -0.24
SPIDR-201ENST00000297423 SDHAP31040 664 aa13.58□□□□□ -0.24
SPIDR-201ENST00000297423 RBM34P42696 430 aaKnown RBP13.58□□□□□ -0.24
SPIDR-201ENST00000297423 SHC2P98077 582 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms