RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 A0A1B0GVG6 124 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 ZNF254O75437 659 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 VAMP5O95183 116 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 TRMT12Q53H54 448 aaKnown RBP11.77□□□□□ -0.53
PTCD1-201ENST00000292478 ZNF385BQ569K4 471 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 AADACL4Q5VUY2 407 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 STEAP1BQ6NZ63 245 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 GPR155Q7Z3F1 870 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 BPHLQ86WA6 291 aaPredicted RBP11.77□□□□□ -0.53
PTCD1-201ENST00000292478 OCSTAMPQ9BR26 566 aa11.77□□□□□ -0.53
PTCD1-201ENST00000292478 TMPRSS11DO60235 418 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 PMS2P2O95744 297 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 IL32P24001 234 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 KCNJ8Q15842 424 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 LCN10Q6JVE6 187 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 Q6ZTK2 550 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 CNEP1R1Q8N9A8 125 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 TMEM178AQ8NBL3 297 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 MORN4Q8NDC4 146 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 CLEC2DQ9UHP7 191 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 PPICP45877 212 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 PRAMEF20Q5VT98 475 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 LIMS2Q7Z4I7 341 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 PFN4Q8NHR9 129 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 CSF3RQ99062 836 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 MKRN2Q9H000 416 aaKnown RBP11.76□□□□□ -0.53
PTCD1-201ENST00000292478 C11orf54Q9H0W9 315 aaPredicted RBP11.76□□□□□ -0.53
PTCD1-201ENST00000292478 GAREM1Q9H706 876 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 PRMT8Q9NR22 394 aaPredicted RBP11.76□□□□□ -0.53
PTCD1-201ENST00000292478 NDUFB11Q9NX14 153 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 TMEM127O75204 238 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 KCNK2O95069 426 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 IGFBP6P24592 240 aaPredicted RBP11.76□□□□□ -0.53
PTCD1-201ENST00000292478 HOXD12P35452 270 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 ZNF93P35789 620 aaPredicted RBP11.76□□□□□ -0.53
PTCD1-201ENST00000292478 SORDQ00796 357 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 TMEM31Q5JXX7 168 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 B3GLCTQ6Y288 498 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 RNF165Q6ZSG1 346 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 SIAH3Q8IW03 269 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 PKMYT1Q99640 499 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 PHF7Q9BWX1 381 aaPredicted RBP11.76□□□□□ -0.53
PTCD1-201ENST00000292478 TEX101Q9BY14 249 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 MOB1AQ9H8S9 216 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 KLRC4-KLRK1H3BQV0 150 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 P2RY10O00398 339 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 CYB5BO43169 146 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 GLSO94925 669 aaPredicted RBP11.76□□□□□ -0.53
PTCD1-201ENST00000292478 EVI2BP34910 448 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 OR1D5P58170 312 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 POU4F3Q15319 338 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 S100A7AQ86SG5 101 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 TCTEX1D2Q8WW35 142 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 SLC6A17Q9H1V8 727 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 GPR55Q9Y2T6 319 aaPredicted RBP11.76□□□□□ -0.53
PTCD1-201ENST00000292478 LRP5LA4QPB2 252 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 ZNF587BE7ETH6 402 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 HOXB5P09067 269 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 SLC19A1P41440 591 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 FAHD1Q6P587 224 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 ZNF610Q8N9Z0 462 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 ZNF511Q8NB15 262 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 OR11L1Q8NGX0 322 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 GOT1L1Q8NHS2 421 aaPredicted RBP11.76□□□□□ -0.53
PTCD1-201ENST00000292478 RASD2Q96D21 266 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 ACKR4Q9NPB9 350 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 ASB1Q9Y576 335 aa11.76□□□□□ -0.53
PTCD1-201ENST00000292478 MPPED1O15442 326 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 CLDN12P56749 244 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 LHX8Q68G74 356 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 RBM45Q8IUH3 476 aaKnown RBP11.75□□□□□ -0.53
PTCD1-201ENST00000292478 CA13Q8N1Q1 262 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 SYS1Q8N2H4 156 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 BCORP1Q8N888 145 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 SGK3Q96BR1 496 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 C6orf106Q9H6K1 298 aaPredicted RBP11.75□□□□□ -0.53
PTCD1-201ENST00000292478 SCPEP1Q9HB40 452 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 PCDHGA1Q9Y5H4 931 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 K7EPK0 472 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 OR7C1O76099 320 aaPredicted RBP11.75□□□□□ -0.53
PTCD1-201ENST00000292478 TSPAN12O95859 305 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 TGM6O95932 706 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 BLVRBP30043 206 aaPredicted RBP11.75□□□□□ -0.53
PTCD1-201ENST00000292478 RPS19P39019 145 aaKnown RBP11.75□□□□□ -0.53
PTCD1-201ENST00000292478 ALDH3B1P43353 468 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 MAP2K6P52564 334 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 OPCMLQ14982 345 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 CD276Q5ZPR3 534 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 KMT5CQ86Y97 462 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 FAM71E2Q8N5Q1 922 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 LILRB4Q8NHJ6 448 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 NT5CQ8TCD5 201 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 IL1F10Q8WWZ1 152 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 UCN3Q969E3 161 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 FBXO8Q9NRD0 319 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 ZNF223Q9UK11 482 aaPredicted RBP11.75□□□□□ -0.53
PTCD1-201ENST00000292478 TMEM200CA6NKL6 621 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 CRYZL1O95825 349 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 PLA2G7Q13093 441 aa11.75□□□□□ -0.53
PTCD1-201ENST00000292478 PLGLAQ15195 96 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms