RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ARPC3O15145 178 aa15.19■□□□□ 0.02
CPSF4-201ENST00000292476 SSR4P51571 173 aa15.19■□□□□ 0.02
CPSF4-201ENST00000292476 SLC16A1P53985 500 aa15.19■□□□□ 0.02
CPSF4-201ENST00000292476 RAB25P57735 213 aa15.19■□□□□ 0.02
CPSF4-201ENST00000292476 CRYZQ08257 329 aaKnown RBP15.19■□□□□ 0.02
CPSF4-201ENST00000292476 CHAF1BQ13112 559 aa15.19■□□□□ 0.02
CPSF4-201ENST00000292476 IL10RAQ13651 578 aa15.19■□□□□ 0.02
CPSF4-201ENST00000292476 TATDN3Q17R31 274 aa15.19■□□□□ 0.02
CPSF4-201ENST00000292476 CCDC58Q4VC31 144 aa15.19■□□□□ 0.02
CPSF4-201ENST00000292476 C5orf46Q6UWT4 87 aa15.19■□□□□ 0.02
CPSF4-201ENST00000292476 BAIAP2L2Q6UXY1 529 aa15.19■□□□□ 0.02
CPSF4-201ENST00000292476 B3GLCTQ6Y288 498 aa15.19■□□□□ 0.02
CPSF4-201ENST00000292476 DPY19L2P2Q6ZN68 376 aa15.19■□□□□ 0.02
CPSF4-201ENST00000292476 NOXA1Q86UR1 476 aa15.19■□□□□ 0.02
CPSF4-201ENST00000292476 RPS19BP1Q86WX3 136 aaKnown RBP15.19■□□□□ 0.02
CPSF4-201ENST00000292476 DUSP19Q8WTR2 217 aa15.19■□□□□ 0.02
CPSF4-201ENST00000292476 RNF170Q96K19 258 aa15.19■□□□□ 0.02
CPSF4-201ENST00000292476 NDEL1Q9GZM8 345 aa15.19■□□□□ 0.02
CPSF4-201ENST00000292476 METTL7AQ9H8H3 244 aa15.19■□□□□ 0.02
CPSF4-201ENST00000292476 DMXL2Q8TDJ6 3036 aa15.19■□□□□ 0.02
CPSF4-201ENST00000292476 ANKUB1A6NFN9 424 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 J3QLW9 94 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 GATBO75879 557 aaKnown RBP15.18■□□□□ 0.02
CPSF4-201ENST00000292476 SERPINA7P05543 415 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 PSKH1P11801 424 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 ZNF19P17023 458 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 CXCR1P25024 350 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 SHC1P29353 583 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 PITPNBP48739 271 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 GBX2P52951 348 aaPredicted RBP15.18■□□□□ 0.02
CPSF4-201ENST00000292476 CDONQ4KMG0 1287 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 BICRALQ6AI39 1079 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 PYHIN1Q6K0P9 492 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 JMJD6Q6NYC1 403 aaPredicted RBP15.18■□□□□ 0.02
CPSF4-201ENST00000292476 LYPD8Q6UX82 237 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 C16orf47Q6ZP98 133 aaPredicted RBP15.18■□□□□ 0.02
CPSF4-201ENST00000292476 GRINAQ7Z429 371 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 CEACAM19Q7Z692 300 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 ST8SIA1Q92185 356 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 CMTM3Q96MX0 182 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 ERMAPQ96PL5 475 aaPredicted RBP15.18■□□□□ 0.02
CPSF4-201ENST00000292476 GPX7Q96SL4 187 aaPredicted RBP15.18■□□□□ 0.02
CPSF4-201ENST00000292476 ZCCHC4Q9H5U6 513 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 NIPAL2Q9H841 368 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 RPRD1BQ9NQG5 326 aaKnown RBP15.18■□□□□ 0.02
CPSF4-201ENST00000292476 ABRACLQ9P1F3 81 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 DKK4Q9UBT3 224 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 MALT1Q9UDY8 824 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 RAXQ9Y2V3 346 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 RBMX2Q9Y388 322 aaKnown RBP15.18■□□□□ 0.02
CPSF4-201ENST00000292476 ACACAQ13085 2346 aa15.18■□□□□ 0.02
CPSF4-201ENST00000292476 E9PI62 339 aa15.17■□□□□ 0.02
CPSF4-201ENST00000292476 OIP5O43482 229 aa15.17■□□□□ 0.02
CPSF4-201ENST00000292476 TLX3O43711 291 aaPredicted RBP15.17■□□□□ 0.02
CPSF4-201ENST00000292476 ARL6IP5O75915 188 aa15.17■□□□□ 0.02
CPSF4-201ENST00000292476 TACR3P29371 465 aa15.17■□□□□ 0.02
CPSF4-201ENST00000292476 POLR2HP52434 150 aaKnown RBP15.17■□□□□ 0.02
CPSF4-201ENST00000292476 MAP2K6P52564 334 aa15.17■□□□□ 0.02
CPSF4-201ENST00000292476 OR12D2P58182 307 aa15.17■□□□□ 0.02
CPSF4-201ENST00000292476 IGF2-ASQ6U949 168 aa15.17■□□□□ 0.02
CPSF4-201ENST00000292476 ASCC1Q8N9N2 400 aaKnown RBP15.17■□□□□ 0.02
CPSF4-201ENST00000292476 GPR119Q8TDV5 335 aa15.17■□□□□ 0.02
CPSF4-201ENST00000292476 TRIM63Q969Q1 353 aa15.17■□□□□ 0.02
CPSF4-201ENST00000292476 RFT1Q96AA3 541 aa15.17■□□□□ 0.02
CPSF4-201ENST00000292476 SMIM19Q96E16 107 aa15.17■□□□□ 0.02
CPSF4-201ENST00000292476 SLA2Q9H6Q3 261 aa15.17■□□□□ 0.02
CPSF4-201ENST00000292476 ASCL3Q9NQ33 180 aa15.17■□□□□ 0.02
CPSF4-201ENST00000292476 WDR70Q9NW82 654 aa15.17■□□□□ 0.02
CPSF4-201ENST00000292476 P4HTMQ9NXG6 502 aa15.17■□□□□ 0.02
CPSF4-201ENST00000292476 TAS2R10Q9NYW0 307 aa15.17■□□□□ 0.02
CPSF4-201ENST00000292476 PPP4R1LQ9P1A2 415 aa15.17■□□□□ 0.02
CPSF4-201ENST00000292476 NUFIP1Q9UHK0 495 aaKnown RBP15.17■□□□□ 0.02
CPSF4-201ENST00000292476 FBXL4Q9UKA2 621 aa15.17■□□□□ 0.02
CPSF4-201ENST00000292476 ZNF337Q9Y3M9 751 aa15.17■□□□□ 0.02
CPSF4-201ENST00000292476 IGLV3-32A0A0A0MS00 114 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 CENPBD1B2RD01 187 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 TERTO14746 1132 aaKnown RBP15.16■□□□□ 0.02
CPSF4-201ENST00000292476 GPRIN2O60269 458 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 ZNF354AO60765 605 aaPredicted RBP15.16■□□□□ 0.02
CPSF4-201ENST00000292476 SLC25A12O75746 678 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 MRPL3P09001 348 aaKnown RBP15.16■□□□□ 0.02
CPSF4-201ENST00000292476 ERP29P30040 261 aaKnown RBP15.16■□□□□ 0.02
CPSF4-201ENST00000292476 MLF1P58340 268 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 RPS18P62269 152 aaKnown RBP15.16■□□□□ 0.02
CPSF4-201ENST00000292476 SLC3A1Q07837 685 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 CDK5R1Q15078 307 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 COL28A1Q2UY09 1125 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 ACSM3Q53FZ2 586 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 RPL22L1Q6P5R6 122 aaKnown RBP15.16■□□□□ 0.02
CPSF4-201ENST00000292476 TMEM156Q8N614 296 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 IL22RA1Q8N6P7 574 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 OR4M1Q8NGD0 313 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 OR52E2Q8NGJ4 325 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 UBASH3BQ8TF42 649 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 LIPHQ8WWY8 451 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 SGCZQ96LD1 299 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 DCBLD2Q96PD2 775 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 RTN4RQ9BZR6 473 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 CDCP1Q9H5V8 836 aa15.16■□□□□ 0.02
CPSF4-201ENST00000292476 RASD1Q9Y272 281 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms