RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 ALG10BQ5I7T1 473 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 TMEM69Q5SWH9 247 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 PWWP2BQ6NUJ5 590 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 FAAP20Q6NZ36 180 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 FIGLAQ6QHK4 219 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 UQCC3Q6UW78 93 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 MOB3CQ70IA8 216 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 NUP54Q7Z3B4 507 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 CA13Q8N1Q1 262 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 C1orf216Q8TAB5 229 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 SNX33Q8WV41 574 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 FGF13Q92913 245 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 MIB2Q96AX9 1013 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 ANKRD9Q96BM1 317 aaPredicted RBP9.46□□□□□ -0.9
SKA1-201ENST00000285116 HAVCR1Q96D42 359 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 CTSFQ9UBX1 484 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 DCHS1Q96JQ0 3298 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 CFAP47Q6ZTR5 3102 aa9.46□□□□□ -0.9
SKA1-201ENST00000285116 TRBV5-5A0A0J9YX44 114 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 BLACEA4D250 179 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 TNFRSF10CO14798 259 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 FOXS1O43638 330 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 GLCEO94923 617 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 S1PR1P21453 382 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 OC90Q02509 493 aaPredicted RBP9.45□□□□□ -0.9
SKA1-201ENST00000285116 RBMS2Q15434 407 aaKnown RBP9.45□□□□□ -0.9
SKA1-201ENST00000285116 HES5Q5TA89 166 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 PSRC1Q6PGN9 363 aaPredicted RBP9.45□□□□□ -0.9
SKA1-201ENST00000285116 TSSK4Q6SA08 328 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 FCRLAQ7L513 359 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 OR4N5Q8IXE1 308 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 EXD3Q8N9H8 876 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 ZMYND19Q96E35 227 aaPredicted RBP9.45□□□□□ -0.9
SKA1-201ENST00000285116 MNTQ99583 582 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 NOX4Q9NPH5 578 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 MKKSQ9NPJ1 570 aaPredicted RBP9.45□□□□□ -0.9
SKA1-201ENST00000285116 MOKQ9UQ07 419 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 ZNF337Q9Y3M9 751 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 V9GY05 133 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 A0A087WUJ7 227 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 LRRC72A6NJI9 287 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 CTNSO60931 367 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 DNAJB6O75190 326 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 ZNF432O94892 652 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 APBB3O95704 486 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 SPI1P17947 270 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 CSRP1P21291 193 aaKnown RBP9.45□□□□□ -0.9
SKA1-201ENST00000285116 CNR1P21554 472 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 STARP49675 285 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 ADPRHP54922 357 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 RAB38P57729 211 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 NFATC4Q14934 902 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 CSRP2Q16527 193 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 C2orf68Q2NKX9 166 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 FCRLBQ6BAA4 426 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 HAGHLQ6PII5 290 aaPredicted RBP9.45□□□□□ -0.9
SKA1-201ENST00000285116 SERPINA12Q8IW75 414 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 ZNF440Q8IYI8 595 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 OR1M1Q8NGA1 313 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 OR4D10Q8NGI6 311 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 BAHD1Q8TBE0 780 aaPredicted RBP9.45□□□□□ -0.9
SKA1-201ENST00000285116 NARS2Q96I59 477 aaKnown RBP9.45□□□□□ -0.9
SKA1-201ENST00000285116 PIGMQ9H3S5 423 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 GAREM1Q9H706 876 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 TMEM74BQ9NUR3 256 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 USP36Q9P275 1121 aaKnown RBP9.45□□□□□ -0.9
SKA1-201ENST00000285116 EPHA6Q9UF33 1036 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 SCN3AQ9NY46 2000 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 RFPL4AA6NLU0 287 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 TTLL8A6PVC2 850 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 DISC1C4P0D8 188 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 RFPL4AL1F8VTS6 287 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 LINC01387J3KSC0 135 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 EML2O95834 649 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 TXNDC12O95881 172 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 CT62P0C5K7 136 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 EMDP50402 254 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 ARHGDIBP52566 201 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 PRPS1P60891 318 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 POLR2GP62487 172 aaKnown RBP eCLIP9.45□□□□□ -0.9
SKA1-201ENST00000285116 IGLV3-21P80748 117 aaPredicted RBP9.45□□□□□ -0.9
SKA1-201ENST00000285116 SSBP1Q04837 148 aaKnown RBP9.45□□□□□ -0.9
SKA1-201ENST00000285116 CBFBQ13951 182 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 TSC22D1Q15714 1073 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 MICBQ29980 383 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 LINC01590Q5TEZ4 76 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 FIGNL1Q6PIW4 674 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 ZAR1Q86SH2 424 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 ZNF595Q8IYB9 648 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 SVBPQ8N300 66 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 TMEM52Q8NDY8 209 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 SDR9C7Q8NEX9 313 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 ZCCHC10Q8TBK6 192 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 RGP1Q92546 391 aaPredicted RBP9.45□□□□□ -0.9
SKA1-201ENST00000285116 THRSPQ92748 146 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 TSNAXQ99598 290 aaKnown RBP9.45□□□□□ -0.9
SKA1-201ENST00000285116 GABRG3Q99928 467 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 SFXN1Q9H9B4 322 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 GNG8Q9UK08 70 aa9.45□□□□□ -0.9
SKA1-201ENST00000285116 ZFHX2Q9C0A1 2572 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms