RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 PKD1L2Q7Z442 2459 aa16.84■□□□□ 0.29
PDLIM3-202ENST00000284770 OR6C68A6NDL8 312 aa16.83■□□□□ 0.28
PDLIM3-202ENST00000284770 STSP08842 583 aa16.83■□□□□ 0.28
PDLIM3-202ENST00000284770 ADRA2AP08913 450 aa16.83■□□□□ 0.28
PDLIM3-202ENST00000284770 PTGS2P35354 604 aa16.83■□□□□ 0.28
PDLIM3-202ENST00000284770 BIDP55957 195 aa16.83■□□□□ 0.28
PDLIM3-202ENST00000284770 RUNX1T1Q06455 604 aa16.83■□□□□ 0.28
PDLIM3-202ENST00000284770 RASGEF1BQ0VAM2 473 aa16.83■□□□□ 0.28
PDLIM3-202ENST00000284770 EEF1A1P5Q5VTE0 462 aa16.83■□□□□ 0.28
PDLIM3-202ENST00000284770 HDDC2Q7Z4H3 204 aa16.83■□□□□ 0.28
PDLIM3-202ENST00000284770 ADGRE4PQ86SQ3 457 aa16.83■□□□□ 0.28
PDLIM3-202ENST00000284770 ABHD3Q8WU67 409 aa16.83■□□□□ 0.28
PDLIM3-202ENST00000284770 OTULINQ96BN8 352 aa16.83■□□□□ 0.28
PDLIM3-202ENST00000284770 ADAD1Q96M93 576 aaKnown RBP16.83■□□□□ 0.28
PDLIM3-202ENST00000284770 SNX18Q96RF0 628 aa16.83■□□□□ 0.28
PDLIM3-202ENST00000284770 EMC6Q9BV81 110 aa16.83■□□□□ 0.28
PDLIM3-202ENST00000284770 H2AFY2Q9P0M6 372 aaPredicted RBP16.83■□□□□ 0.28
PDLIM3-202ENST00000284770 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.83■□□□□ 0.28
PDLIM3-202ENST00000284770 ZNF175Q9Y473 711 aa16.83■□□□□ 0.28
PDLIM3-202ENST00000284770 PRSS37A4D1T9 235 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 SNTNA6NMZ2 147 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 AHRRA9YTQ3 701 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 AQP8O94778 261 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 CDH11P55287 796 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 NEDD8Q15843 81 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 NIPAL3Q6P499 406 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 PLXDC2Q6UX71 529 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 ZIC4Q8N9L1 334 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 OR5M9Q8NGP3 310 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 OR6X1Q8NH79 312 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 RFKQ969G6 155 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 TMIGD2Q96BF3 282 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 WBP1Q96G27 269 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 ZNF385AQ96PM9 386 aaKnown RBP16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 NMNAT2Q9BZQ4 307 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 MED20Q9H944 212 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 ASF1BQ9NVP2 202 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 KLHL9Q9P2J3 617 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 ING1Q9UK53 422 aaPredicted RBP16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 FLVCR1Q9Y5Y0 555 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 IGKV3D-15A0A087WSY6 115 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 SLC35F4A4IF30 521 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 SLC22A20A6NK97 555 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 H7C1C5 153 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 M0R3G1 203 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 RENP00797 406 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 HTR1FP30939 366 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 CLDN17P56750 224 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 LCN6P62502 163 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 RNPS1Q15287 305 aaKnown RBP16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 ST3GAL2Q16842 350 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 PRR30Q53SZ7 412 aaPredicted RBP16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 FOXB2Q5VYV0 432 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 GID4Q8IVV7 300 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 WDFY1Q8IWB7 410 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 STX19Q8N4C7 294 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 SLC25A44Q96H78 314 aaPredicted RBP16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 KCNK17Q96T54 332 aa16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 VSX1Q9NZR4 365 aaPredicted RBP16.82■□□□□ 0.28
PDLIM3-202ENST00000284770 ZNF726A6NNF4 738 aa16.81■□□□□ 0.28
PDLIM3-202ENST00000284770 AHCYL1O43865 530 aa16.81■□□□□ 0.28
PDLIM3-202ENST00000284770 TRMUO75648 421 aaKnown RBP16.81■□□□□ 0.28
PDLIM3-202ENST00000284770 SLC2A5P22732 501 aa16.81■□□□□ 0.28
PDLIM3-202ENST00000284770 MAP2K4P45985 399 aa16.81■□□□□ 0.28
PDLIM3-202ENST00000284770 MTNR1AP48039 350 aa16.81■□□□□ 0.28
PDLIM3-202ENST00000284770 SLC25A1P53007 311 aa16.81■□□□□ 0.28
PDLIM3-202ENST00000284770 IRF3Q14653 427 aa16.81■□□□□ 0.28
PDLIM3-202ENST00000284770 GTF2IRD2BQ6EKJ0 949 aa16.81■□□□□ 0.28
PDLIM3-202ENST00000284770 GTF2IRD2Q86UP8 949 aa16.81■□□□□ 0.28
PDLIM3-202ENST00000284770 LGALS12Q96DT0 336 aa16.81■□□□□ 0.28
PDLIM3-202ENST00000284770 CDCA4Q9BXL8 241 aa16.81■□□□□ 0.28
PDLIM3-202ENST00000284770 MRPL13Q9BYD1 178 aaKnown RBP16.81■□□□□ 0.28
PDLIM3-202ENST00000284770 SYT4Q9H2B2 425 aa16.81■□□□□ 0.28
PDLIM3-202ENST00000284770 VCX3AQ9NNX9 186 aa16.81■□□□□ 0.28
PDLIM3-202ENST00000284770 ACOT13Q9NPJ3 140 aa16.81■□□□□ 0.28
PDLIM3-202ENST00000284770 RPRD1BQ9NQG5 326 aaKnown RBP16.81■□□□□ 0.28
PDLIM3-202ENST00000284770 CLCF1Q9UBD9 225 aa16.81■□□□□ 0.28
PDLIM3-202ENST00000284770 TLN1Q9Y490 2541 aaKnown RBP16.81■□□□□ 0.28
PDLIM3-202ENST00000284770 SLC22A23A1A5C7 686 aa16.8■□□□□ 0.28
PDLIM3-202ENST00000284770 TTLL8A6PVC2 850 aa16.8■□□□□ 0.28
PDLIM3-202ENST00000284770 FADS2O95864 444 aaKnown RBP16.8■□□□□ 0.28
PDLIM3-202ENST00000284770 TGM6O95932 706 aa16.8■□□□□ 0.28
PDLIM3-202ENST00000284770 IGHG1P01857 330 aa16.8■□□□□ 0.28
PDLIM3-202ENST00000284770 CLUP10909 449 aa16.8■□□□□ 0.28
PDLIM3-202ENST00000284770 FCGR2AP12318 317 aa16.8■□□□□ 0.28
PDLIM3-202ENST00000284770 RAB40BQ12829 278 aa16.8■□□□□ 0.28
PDLIM3-202ENST00000284770 SVOPQ8N4V2 548 aa16.8■□□□□ 0.28
PDLIM3-202ENST00000284770 OR9Q1Q8NGQ5 310 aa16.8■□□□□ 0.28
PDLIM3-202ENST00000284770 KISS1RQ969F8 398 aaPredicted RBP16.8■□□□□ 0.28
PDLIM3-202ENST00000284770 MUL1Q969V5 352 aa16.8■□□□□ 0.28
PDLIM3-202ENST00000284770 RNFT2Q96EX2 444 aa16.8■□□□□ 0.28
PDLIM3-202ENST00000284770 OR51V1Q9H2C8 321 aa16.8■□□□□ 0.28
PDLIM3-202ENST00000284770 RNF122Q9H9V4 155 aa16.8■□□□□ 0.28
PDLIM3-202ENST00000284770 BCO1Q9HAY6 547 aa16.8■□□□□ 0.28
PDLIM3-202ENST00000284770 MAP1BP46821 2468 aaKnown RBP16.8■□□□□ 0.28
PDLIM3-202ENST00000284770 GPR171O14626 319 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 PGA4P0DJD7 388 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 PGA3P0DJD8 388 aa16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 DBPQ10586 325 aaPredicted RBP16.79■□□□□ 0.28
PDLIM3-202ENST00000284770 CAMK2DQ13557 499 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms