RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 LIPNQ5VXI9 398 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 CDCP2Q5VXM1 449 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 DPY19L4Q7Z388 723 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 PPP1R32Q7Z5V6 425 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 ARMC10Q8N2F6 343 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 YIPF7Q8N8F6 280 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 OR4K17Q8NGC6 315 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 CT55Q8WUE5 264 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 PDCD1LG2Q9BQ51 273 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 DDA1Q9BW61 102 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 PTGES2Q9H7Z7 377 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 FANCFQ9NPI8 374 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 TIGARQ9NQ88 270 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 C14orf119Q9NWQ9 140 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 PISDQ9UG56 409 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 B3GALT5Q9Y2C3 310 aa8.62□□□□□ -1.03
TRIM55-201ENST00000276573 KIF26BQ2KJY2 2108 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 A0A0G2JK05 382 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 ANKRD33BA6NCL7 494 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 NPIPB13A6NJU9 1138 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 NPIPB4C9JG80 1138 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 MASP2O00187 686 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 ZNF593O00488 134 aaPredicted RBP8.61□□□□□ -1.03
TRIM55-201ENST00000276573 ARL6IP5O75915 188 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 ABHD16AO95870 558 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 KRT8P05787 483 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 UCHL1P09936 223 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 ZNF806P0C7X5 589 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 JMJD7P0C870 316 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 ICAM2P13598 275 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 ADH6P28332 368 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 CRABP1P29762 137 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 CLDN6P56747 220 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 DEFA1P59665 94 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 DEFA3P59666 94 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 RPS18P62269 152 aaKnown RBP8.61□□□□□ -1.03
TRIM55-201ENST00000276573 FOXK1P85037 733 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 EGR3Q06889 387 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 MRPL28Q13084 256 aaKnown RBP8.61□□□□□ -1.03
TRIM55-201ENST00000276573 MYBPHQ13203 477 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 ALKBH1Q13686 389 aaKnown RBP8.61□□□□□ -1.03
TRIM55-201ENST00000276573 ETFDHQ16134 617 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 BAK1Q16611 211 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 PRAMEF20Q5VT98 475 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 SLC22A10Q63ZE4 541 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 HBMQ6B0K9 141 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 METAP1DQ6UB28 335 aaPredicted RBP8.61□□□□□ -1.03
TRIM55-201ENST00000276573 NHLRC1Q6VVB1 395 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 FAM220AQ7Z4H9 259 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 PLCZ1Q86YW0 608 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 DND1Q8IYX4 353 aaKnown RBP8.61□□□□□ -1.03
TRIM55-201ENST00000276573 GDPD1Q8N9F7 314 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 OR5M1Q8NGP8 315 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 OTOSQ8NHW6 89 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 HAVCR2Q8TDQ0 301 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 PAQR8Q8TEZ7 354 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 THEM6Q8WUY1 208 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 SNRNP27Q8WVK2 155 aaKnown RBP8.61□□□□□ -1.03
TRIM55-201ENST00000276573 ASB10Q8WXI3 467 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 PHYHIPQ92561 330 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 KIAA1143Q96AT1 154 aaPredicted RBP8.61□□□□□ -1.03
TRIM55-201ENST00000276573 KCTD12Q96CX2 325 aaKnown RBP8.61□□□□□ -1.03
TRIM55-201ENST00000276573 LIN37Q96GY3 246 aaPredicted RBP8.61□□□□□ -1.03
TRIM55-201ENST00000276573 MAP6Q96JE9 813 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 ZCCHC4Q9H5U6 513 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 PROK2Q9HC23 129 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 SH2D2AQ9NP31 389 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 MRPL22Q9NWU5 206 aaKnown RBP8.61□□□□□ -1.03
TRIM55-201ENST00000276573 ALKBH4Q9NXW9 302 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 ETAA1Q9NY74 926 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 ZNF281Q9Y2X9 895 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 A0A087WZY1 265 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 A0A1W2PPK0 400 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 CENPBD1B2RD01 187 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 C9orf172C9J069 976 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 NPIPA5E9PKD4 350 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 PHYHO14832 338 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 SLC19A2O60779 497 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 TMCC2O75069 709 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 RPP14O95059 124 aaKnown RBP8.61□□□□□ -1.03
TRIM55-201ENST00000276573 PTTG1O95997 202 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 HLA-DQA2P01906 255 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 OPN1LWP04000 364 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 CCL3P10147 92 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 PSKH1P11801 424 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 IFNGR1P15260 489 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 CTLA4P16410 223 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 RAB3BP20337 219 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 FKBP2P26885 142 aaKnown RBP8.61□□□□□ -1.03
TRIM55-201ENST00000276573 OTX2P32243 289 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 THBS2P35442 1172 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 EIF1P41567 113 aaKnown RBP8.61□□□□□ -1.03
TRIM55-201ENST00000276573 RPS27P42677 84 aaKnown RBP8.61□□□□□ -1.03
TRIM55-201ENST00000276573 DAP3P51398 398 aaKnown RBP8.61□□□□□ -1.03
TRIM55-201ENST00000276573 OR10A3P58181 314 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 HSF1Q00613 529 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 CNIH2Q6PI25 160 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 SLC35D2Q76EJ3 337 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 TRILQ7L0X0 811 aa8.61□□□□□ -1.03
TRIM55-201ENST00000276573 GDPD3Q7L5L3 318 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms