RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 ANKRD61A6NGH8 418 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 ZNF705GA8MUZ8 300 aaPredicted RBP10.55□□□□□ -0.72
USP53-201ENST00000274030 OR8B8Q15620 311 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 YRDCQ86U90 279 aaKnown RBP10.55□□□□□ -0.72
USP53-201ENST00000274030 OR6V1Q8N148 313 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 OR13F1Q8NGS4 319 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 C8orf44Q96CB5 159 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 MS4A6EQ96DS6 147 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 PBX4Q9BYU1 374 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 TCEAL2Q9H3H9 227 aaPredicted RBP10.55□□□□□ -0.72
USP53-201ENST00000274030 BANF2Q9H503 90 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 RNF167Q9H6Y7 350 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 LANCL2Q9NS86 450 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 C19orf12Q9NSK7 152 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 PUS1Q9Y606 427 aaKnown RBP eCLIP10.55□□□□□ -0.72
USP53-201ENST00000274030 A0A1B0GX78 115 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 A0A1W2PR48 441 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 OR5K3A6NET4 321 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 NME2P22392 152 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 CHRNB4P30926 498 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 ACSM1Q08AH1 577 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 PEA15Q15121 130 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 PHLDA2Q53GA4 152 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 RNLSQ5VYX0 342 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 RTL6Q6ICC9 239 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 OGFOD3Q6PK18 319 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 MISPQ8IVT2 679 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 KCNG3Q8TAE7 436 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 CNTNAP3Q9BZ76 1288 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 EPHX3Q9H6B9 360 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 A8MVM7 634 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 ZNF587BE7ETH6 402 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 FABP7O15540 132 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 SIX6O95475 246 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 GSTP1P09211 210 aaKnown RBP10.55□□□□□ -0.72
USP53-201ENST00000274030 GLI4P10075 376 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 FPR3P25089 353 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 CD27P26842 260 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 SRP9P49458 86 aaKnown RBP10.55□□□□□ -0.72
USP53-201ENST00000274030 EPHA5P54756 1037 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 RAP2BP61225 183 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 ZNF77Q15935 545 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 YOD1Q5VVQ6 348 aaPredicted RBP10.55□□□□□ -0.72
USP53-201ENST00000274030 TCTEX1D2Q8WW35 142 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 LINC01599Q8WXQ3 324 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 MYEOVQ96EZ4 313 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 EVA1AQ9H8M9 152 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 STEAP1Q9UHE8 339 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 OR52A1Q9UKL2 312 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 F5P12259 2224 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 FITM1A5D6W6 292 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 PRAMEF25A6NGN4 478 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 CRYZL1O95825 349 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 CASP3P42574 277 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 CYB561P49447 251 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 PRTGQ2VWP7 1150 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 SYT13Q7L8C5 426 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 OR5AS1Q8N127 324 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 GOT1L1Q8NHS2 421 aaPredicted RBP10.55□□□□□ -0.72
USP53-201ENST00000274030 FAM213BQ8TBF2 198 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 ST7LQ8TDW4 575 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 FAM3DQ96BQ1 224 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 TMEM38AQ9H6F2 299 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 LUZP4Q9P127 313 aa10.55□□□□□ -0.72
USP53-201ENST00000274030 SLC5A10A0PJK1 596 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 SYT5O00445 386 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 TXNL1O43396 289 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 CLDN1O95832 211 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 SERPINF1P36955 418 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 NPY4RP50391 375 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 BTN1A1Q13410 526 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 ZMAT1Q5H9K5 638 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 STEAP1BQ6NZ63 245 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 DLEU7Q6UYE1 221 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 CPEB2Q7Z5Q1 589 aaKnown RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 LIPHQ8WWY8 451 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 C11orf54Q9H0W9 315 aaPredicted RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 LTB4R2Q9NPC1 389 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 KIF25Q9UIL4 384 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 PIGLQ9Y2B2 252 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 RPS10-NUDT3A0A1W2PQS6 291 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 RPS10P46783 165 aaKnown RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 PLA2G7Q13093 441 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 NKAIN1Q4KMZ8 207 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 PYCR3Q53H96 274 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 YIF1BQ5BJH7 314 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 ANKRD34AQ69YU3 496 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 OR4N2Q8NGD1 307 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 CPNE4Q96A23 557 aaPredicted RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 THOC3Q96J01 351 aaKnown RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 GNG13Q9P2W3 67 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 DAPP1Q9UN19 280 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 GPR55Q9Y2T6 319 aaPredicted RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 KLK4Q9Y5K2 254 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 MYH4Q9Y623 1939 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 DNAJC13O75165 2243 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 ZNF814B7Z6K7 855 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 PHF1O43189 567 aaPredicted RBP10.54□□□□□ -0.72
USP53-201ENST00000274030 SLC2A10O95528 541 aa10.54□□□□□ -0.72
USP53-201ENST00000274030 NFYBP25208 207 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms