RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 HNF1AP20823 631 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 CFPP27918 469 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 AQP1P29972 269 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 GLRXP35754 106 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 RBMXP38159 391 aaKnown RBP7.66□□□□□ -1.18
TPM3-201ENST00000271850 CAPZA2P47755 286 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 PTDSS1P48651 473 aaKnown RBP7.66□□□□□ -1.18
TPM3-201ENST00000271850 EVX1P49640 407 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 CRYBA2P53672 197 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 PCBP3P57721 371 aaKnown RBP7.66□□□□□ -1.18
TPM3-201ENST00000271850 CDK6Q00534 326 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 PUDPQ08623 228 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 C1DQ13901 141 aaKnown RBP7.66□□□□□ -1.18
TPM3-201ENST00000271850 SELPLGQ14242 412 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 RAB39AQ14964 217 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 GSG1Q2KHT4 349 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 ALKBH6Q3KRA9 238 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 GCNT6Q5T4J0 391 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 FAM91A1Q658Y4 838 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 DLEU7Q6UYE1 221 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 ZNF813Q6ZN06 617 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 PTOV1Q86YD1 416 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 RBM45Q8IUH3 476 aaKnown RBP7.66□□□□□ -1.18
TPM3-201ENST00000271850 UEVLDQ8IX04 471 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 SKA3Q8IX90 412 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 MIER2Q8N344 545 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 SCAIQ8N9R8 606 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 OR6S1Q8NH40 331 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 TMEM54Q969K7 222 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 LRR1Q96L50 414 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 FOXB1Q99853 325 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 CPPED1Q9BRF8 314 aaPredicted RBP7.66□□□□□ -1.18
TPM3-201ENST00000271850 RMND5AQ9H871 391 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 LPAR2Q9HBW0 351 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 DYNLRB1Q9NP97 96 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 SLCO1B3Q9NPD5 702 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 ZNF275Q9NSD4 429 aaPredicted RBP7.66□□□□□ -1.18
TPM3-201ENST00000271850 THUMPD1Q9NXG2 353 aaKnown RBP7.66□□□□□ -1.18
TPM3-201ENST00000271850 MRPL39Q9NYK5 338 aaKnown RBP7.66□□□□□ -1.18
TPM3-201ENST00000271850 TAS2R5Q9NYW4 299 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 REV1Q9UBZ9 1251 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 TESQ9UGI8 421 aaKnown RBP7.66□□□□□ -1.18
TPM3-201ENST00000271850 ZNF232Q9UNY5 417 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 USP22Q9UPT9 525 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 CMAHPQ9Y471 501 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 SPEF1Q9Y4P9 236 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 USH1CQ9Y6N9 552 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 DYSFO75923 2080 aa7.66□□□□□ -1.18
TPM3-201ENST00000271850 SLCO1B7G3V0H7 640 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 FAM229AH3BQW9 127 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 M0R233 179 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 DEAF1O75398 565 aaPredicted RBP7.65□□□□□ -1.18
TPM3-201ENST00000271850 MFN2O95140 757 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 OPN1SWP03999 348 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 GAAP10253 952 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 CCL2P13500 99 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 GPX2P18283 190 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 GTF2E2P29084 291 aaKnown RBP7.65□□□□□ -1.18
TPM3-201ENST00000271850 MAGEB1P43366 347 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 SLC18A1P54219 525 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 MAGOHP61326 146 aaKnown RBP7.65□□□□□ -1.18
TPM3-201ENST00000271850 RAB1AP62820 205 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 RUNX1T1Q06455 604 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 MELKQ14680 651 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 DUSP7Q16829 419 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 REEP3Q6NUK4 255 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 ULK3Q6PHR2 472 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 LRFN4Q6PJG9 635 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 C5orf46Q6UWT4 87 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 NET1Q7Z628 596 aaPredicted RBP7.65□□□□□ -1.18
TPM3-201ENST00000271850 CCDC36Q8IYA8 594 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 LRRC17Q8N6Y2 441 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 SMYD1Q8NB12 490 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 PKD1L1Q8TDX9 2849 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 DNAJA4Q8WW22 397 aaPredicted RBP7.65□□□□□ -1.18
TPM3-201ENST00000271850 ARHGDIGQ99819 225 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 ULBP2Q9BZM5 246 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 TMEM38AQ9H6F2 299 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 MOV10Q9HCE1 1003 aaKnown RBP7.65□□□□□ -1.18
TPM3-201ENST00000271850 G6PC2Q9NQR9 355 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 HIF1ANQ9NWT6 349 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 TREM2Q9NZC2 230 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 CORINQ9Y5Q5 1042 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 CACNG2Q9Y698 323 aa7.65□□□□□ -1.18
TPM3-201ENST00000271850 ARHGAP32A7KAX9 2087 aa7.64□□□□□ -1.19
TPM3-201ENST00000271850 IGLV3-9A0A075B6K5 115 aa7.64□□□□□ -1.19
TPM3-201ENST00000271850 B4DSR2 109 aa7.64□□□□□ -1.19
TPM3-201ENST00000271850 C11orf98E9PRG8 122 aa7.64□□□□□ -1.19
TPM3-201ENST00000271850 ERLIN1O75477 346 aa7.64□□□□□ -1.19
TPM3-201ENST00000271850 SERPINI2O75830 405 aa7.64□□□□□ -1.19
TPM3-201ENST00000271850 RGS9O75916 674 aaPredicted RBP7.64□□□□□ -1.19
TPM3-201ENST00000271850 SAGP10523 405 aaPredicted RBP7.64□□□□□ -1.19
TPM3-201ENST00000271850 NQO1P15559 274 aaKnown RBP7.64□□□□□ -1.19
TPM3-201ENST00000271850 ACHEP22303 614 aa7.64□□□□□ -1.19
TPM3-201ENST00000271850 GPR6P46095 362 aaPredicted RBP7.64□□□□□ -1.19
TPM3-201ENST00000271850 IDH3AP50213 366 aa7.64□□□□□ -1.19
TPM3-201ENST00000271850 BIDP55957 195 aa7.64□□□□□ -1.19
TPM3-201ENST00000271850 RGS8P57771 180 aaPredicted RBP7.64□□□□□ -1.19
TPM3-201ENST00000271850 SCARB2Q14108 478 aa7.64□□□□□ -1.19
TPM3-201ENST00000271850 ZNF74Q16587 644 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms