RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 OR52E2Q8NGJ4 325 aa22■■□□□ 1.11
SSBP4-201ENST00000270061 OR5M9Q8NGP3 310 aa22■■□□□ 1.11
SSBP4-201ENST00000270061 SARAFQ96BY9 339 aa22■■□□□ 1.11
SSBP4-201ENST00000270061 TMEM41AQ96HV5 264 aa22■■□□□ 1.11
SSBP4-201ENST00000270061 TEAD3Q99594 435 aa22■■□□□ 1.11
SSBP4-201ENST00000270061 MGLLQ99685 303 aa22■■□□□ 1.11
SSBP4-201ENST00000270061 PTGES2Q9H7Z7 377 aa22■■□□□ 1.11
SSBP4-201ENST00000270061 MED20Q9H944 212 aa22■■□□□ 1.11
SSBP4-201ENST00000270061 HAO2Q9NYQ3 351 aa22■■□□□ 1.11
SSBP4-201ENST00000270061 TNFRSF10DQ9UBN6 386 aa22■■□□□ 1.11
SSBP4-201ENST00000270061 VDAC3Q9Y277 283 aa22■■□□□ 1.11
SSBP4-201ENST00000270061 ADAM18Q9Y3Q7 739 aa22■■□□□ 1.11
SSBP4-201ENST00000270061 J3QRE1 110 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 IGHA1P01876 353 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 CD36P16671 472 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 RPL18Q07020 188 aaKnown RBP21.99■■□□□ 1.11
SSBP4-201ENST00000270061 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.99■■□□□ 1.11
SSBP4-201ENST00000270061 FOXF1Q12946 379 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 MED22Q15528 200 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 SGCBQ16585 318 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 CTF1Q16619 201 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 ARMCX4Q5H9R4 360 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 ZNF787Q6DD87 383 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 TMEM211Q6ICI0 200 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 PLCZ1Q86YW0 608 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 KISS1RQ969F8 398 aaPredicted RBP21.99■■□□□ 1.11
SSBP4-201ENST00000270061 OTULINQ96BN8 352 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 C1GALT1C1Q96EU7 318 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 GNRHR2Q96P88 292 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 NPAS1Q99742 590 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 POTEKPQ9BYX7 375 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 CHCHD3Q9NX63 227 aaKnown RBP21.99■■□□□ 1.11
SSBP4-201ENST00000270061 MED12Q93074 2177 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 TMEM129A0AVI4 362 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 CCDC182A6NF36 153 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 ADH6P28332 368 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 ETV1P50549 477 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 ERVK-25P63136 954 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 MFSD13AQ14CX5 517 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 SPHARQ15513 63 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 OR4K17Q8NGC6 315 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 OR5J2Q8NH18 312 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 OR4K13Q8NH42 304 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 POC1BQ8TC44 478 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 SLC6A15Q9H2J7 730 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 FBXL2Q9UKC9 423 aa21.99■■□□□ 1.11
SSBP4-201ENST00000270061 A0A087WZY1 265 aa21.98■■□□□ 1.11
SSBP4-201ENST00000270061 FIGNL2A6NMB9 653 aa21.98■■□□□ 1.11
SSBP4-201ENST00000270061 FAM47E-STBD1D6RA91 191 aa21.98■■□□□ 1.11
SSBP4-201ENST00000270061 FTCDNL1E5RQL4 147 aa21.98■■□□□ 1.11
SSBP4-201ENST00000270061 MYL12BO14950 172 aa21.98■■□□□ 1.11
SSBP4-201ENST00000270061 TRAPPC6AO75865 159 aa21.98■■□□□ 1.11
SSBP4-201ENST00000270061 CTXN1P60606 82 aa21.98■■□□□ 1.11
SSBP4-201ENST00000270061 LSAMPQ13449 338 aa21.98■■□□□ 1.11
SSBP4-201ENST00000270061 TIGD3Q6B0B8 471 aa21.98■■□□□ 1.11
SSBP4-201ENST00000270061 ZNF585AQ6P3V2 769 aa21.98■■□□□ 1.11
SSBP4-201ENST00000270061 NPEPL1Q8NDH3 523 aa21.98■■□□□ 1.11
SSBP4-201ENST00000270061 OR1J4Q8NGS1 313 aa21.98■■□□□ 1.11
SSBP4-201ENST00000270061 MFSD8Q8NHS3 518 aa21.98■■□□□ 1.11
SSBP4-201ENST00000270061 NEIL3Q8TAT5 605 aa21.98■■□□□ 1.11
SSBP4-201ENST00000270061 DDIT4LQ96D03 193 aa21.98■■□□□ 1.11
SSBP4-201ENST00000270061 TAS2R5Q9NYW4 299 aa21.98■■□□□ 1.11
SSBP4-201ENST00000270061 COQ3Q9NZJ6 369 aa21.98■■□□□ 1.11
SSBP4-201ENST00000270061 SPRR3Q9UBC9 169 aa21.98■■□□□ 1.11
SSBP4-201ENST00000270061 TEX15Q9BXT5 2789 aa21.97■■□□□ 1.11
SSBP4-201ENST00000270061 SNPHO15079 494 aa21.97■■□□□ 1.11
SSBP4-201ENST00000270061 SDHAP31040 664 aa21.97■■□□□ 1.11
SSBP4-201ENST00000270061 EIF1P41567 113 aaKnown RBP21.97■■□□□ 1.11
SSBP4-201ENST00000270061 C1DQ13901 141 aaKnown RBP21.97■■□□□ 1.11
SSBP4-201ENST00000270061 GPR139Q6DWJ6 353 aa21.97■■□□□ 1.11
SSBP4-201ENST00000270061 CYB561A3Q8NBI2 242 aa21.97■■□□□ 1.11
SSBP4-201ENST00000270061 SDR9C7Q8NEX9 313 aa21.97■■□□□ 1.11
SSBP4-201ENST00000270061 OR4F15Q8NGB8 312 aa21.97■■□□□ 1.11
SSBP4-201ENST00000270061 OR11A1Q9GZK7 315 aa21.97■■□□□ 1.11
SSBP4-201ENST00000270061 SERINC1Q9NRX5 453 aa21.97■■□□□ 1.11
SSBP4-201ENST00000270061 MRPL39Q9NYK5 338 aaKnown RBP21.97■■□□□ 1.11
SSBP4-201ENST00000270061 FZD7O75084 574 aa21.97■■□□□ 1.11
SSBP4-201ENST00000270061 CLDN14O95500 239 aa21.97■■□□□ 1.11
SSBP4-201ENST00000270061 SCG5P05408 212 aa21.97■■□□□ 1.11
SSBP4-201ENST00000270061 FKBP2P26885 142 aaKnown RBP21.97■■□□□ 1.11
SSBP4-201ENST00000270061 RGS6P49758 472 aa21.97■■□□□ 1.11
SSBP4-201ENST00000270061 TOMM20Q15388 145 aa21.97■■□□□ 1.11
SSBP4-201ENST00000270061 KLHL12Q53G59 568 aa21.97■■□□□ 1.11
SSBP4-201ENST00000270061 SP5Q6BEB4 398 aaPredicted RBP21.97■■□□□ 1.11
SSBP4-201ENST00000270061 ZBTB8AQ96BR9 441 aa21.97■■□□□ 1.11
SSBP4-201ENST00000270061 NMNAT2Q9BZQ4 307 aa21.97■■□□□ 1.11
SSBP4-201ENST00000270061 OR51V1Q9H2C8 321 aa21.97■■□□□ 1.11
SSBP4-201ENST00000270061 CORINQ9Y5Q5 1042 aa21.97■■□□□ 1.11
SSBP4-201ENST00000270061 EFNA2O43921 213 aa21.96■■□□□ 1.11
SSBP4-201ENST00000270061 APOL3O95236 402 aa21.96■■□□□ 1.11
SSBP4-201ENST00000270061 HPNP05981 417 aa21.96■■□□□ 1.11
SSBP4-201ENST00000270061 LIMS3P0CW19 117 aa21.96■■□□□ 1.11
SSBP4-201ENST00000270061 LIMS4P0CW20 117 aa21.96■■□□□ 1.11
SSBP4-201ENST00000270061 GRPRP30550 384 aa21.96■■□□□ 1.11
SSBP4-201ENST00000270061 ATP6V1E1P36543 226 aa21.96■■□□□ 1.11
SSBP4-201ENST00000270061 PAQR6Q6TCH4 344 aa21.96■■□□□ 1.11
SSBP4-201ENST00000270061 RPRMLQ8N4K4 120 aa21.96■■□□□ 1.11
SSBP4-201ENST00000270061 SLC25A36Q96CQ1 311 aa21.96■■□□□ 1.11
SSBP4-201ENST00000270061 Q96M85 177 aa21.96■■□□□ 1.11
SSBP4-201ENST00000270061 ZNF649Q9BS31 505 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms