RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 GPR50Q13585 617 aa14.65□□□□□ -0.06
TPM1-201ENST00000267996 CDONQ4KMG0 1287 aa14.65□□□□□ -0.06
TPM1-201ENST00000267996 SOWAHCQ53LP3 525 aaPredicted RBP14.65□□□□□ -0.06
TPM1-201ENST00000267996 KLBQ86Z14 1044 aa14.65□□□□□ -0.06
TPM1-201ENST00000267996 WDFY1Q8IWB7 410 aa14.65□□□□□ -0.06
TPM1-201ENST00000267996 SULF2Q8IWU5 870 aa14.65□□□□□ -0.06
TPM1-201ENST00000267996 SYS1Q8N2H4 156 aa14.65□□□□□ -0.06
TPM1-201ENST00000267996 OR14L1PQ8NHC6 308 aa14.65□□□□□ -0.06
TPM1-201ENST00000267996 ZHX1-C8orf76Q96EF9 292 aa14.65□□□□□ -0.06
TPM1-201ENST00000267996 TXNDC15Q96J42 360 aa14.65□□□□□ -0.06
TPM1-201ENST00000267996 KLHL15Q96M94 604 aa14.65□□□□□ -0.06
TPM1-201ENST00000267996 OXGR1Q96P68 337 aa14.65□□□□□ -0.06
TPM1-201ENST00000267996 KCNK17Q96T54 332 aa14.65□□□□□ -0.06
TPM1-201ENST00000267996 HES7Q9BYE0 225 aa14.65□□□□□ -0.06
TPM1-201ENST00000267996 ZNF552Q9H707 407 aaPredicted RBP14.65□□□□□ -0.06
TPM1-201ENST00000267996 A0A0J9YW62 118 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 LOC100506127A0A0U1RQW1 187 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 DNPH1O43598 174 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 TRAF3IP2O43734 574 aaPredicted RBP14.64□□□□□ -0.07
TPM1-201ENST00000267996 NME2P1O60361 137 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 EIF1BO60739 113 aaKnown RBP14.64□□□□□ -0.07
TPM1-201ENST00000267996 SP1P08047 785 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 NME2P22392 152 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 GABRA5P31644 462 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 TGFBR1P36897 503 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 BLVRAP53004 296 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 RPS3AP61247 264 aaKnown RBP14.64□□□□□ -0.07
TPM1-201ENST00000267996 TUBA1BP68363 451 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 TOMM20Q15388 145 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 SLC25A25Q6KCM7 469 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 CD200R1LQ6Q8B3 271 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 USP43Q70EL4 1123 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 TUBA1AQ71U36 451 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 EGFL6Q8IUX8 553 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 UEVLDQ8IX04 471 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 RFLNBQ8N5W9 214 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 HAS2Q92819 552 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 DCSTAMPQ9H295 470 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 ZNF703Q9H7S9 590 aaPredicted RBP14.64□□□□□ -0.07
TPM1-201ENST00000267996 COPS3Q9UNS2 423 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 POLHQ9Y253 713 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 RASD1Q9Y272 281 aa14.64□□□□□ -0.07
TPM1-201ENST00000267996 KLF13Q9Y2Y9 288 aaPredicted RBP14.64□□□□□ -0.07
TPM1-201ENST00000267996 A6NL46 340 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 LINC01387J3KSC0 135 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 GLSO94925 669 aaPredicted RBP14.63□□□□□ -0.07
TPM1-201ENST00000267996 HPNP05981 417 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 CTLA4P16410 223 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 GDF1P27539 372 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 CRABP1P29762 137 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 AGFG1P52594 562 aaKnown RBP14.63□□□□□ -0.07
TPM1-201ENST00000267996 GFRA1P56159 465 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 OR12D2P58182 307 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 ACTA2P62736 377 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 ACTG2P63267 376 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 ZNF684Q5T5D7 378 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 VASNQ6EMK4 673 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 ASB18Q6ZVZ8 466 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 VASH1Q7L8A9 365 aaPredicted RBP14.63□□□□□ -0.07
TPM1-201ENST00000267996 CDC20BQ86Y33 519 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 KBTBD8Q8NFY9 601 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 ZFAND2BQ8WV99 257 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 SLC39A7Q92504 469 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 TRMT61AQ96FX7 289 aaKnown RBP14.63□□□□□ -0.07
TPM1-201ENST00000267996 C4orf36Q96KX1 117 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 DACH2Q96NX9 599 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 MNTQ99583 582 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 MRPL13Q9BYD1 178 aaKnown RBP14.63□□□□□ -0.07
TPM1-201ENST00000267996 RNF167Q9H6Y7 350 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 MED29Q9NX70 200 aa14.63□□□□□ -0.07
TPM1-201ENST00000267996 ZNF891A8MT65 544 aaPredicted RBP14.62□□□□□ -0.07
TPM1-201ENST00000267996 SLC16A7O60669 478 aa14.62□□□□□ -0.07
TPM1-201ENST00000267996 RAMP1O60894 148 aa14.62□□□□□ -0.07
TPM1-201ENST00000267996 CD53P19397 219 aa14.62□□□□□ -0.07
TPM1-201ENST00000267996 KLK2P20151 261 aa14.62□□□□□ -0.07
TPM1-201ENST00000267996 TAS2R43P59537 309 aa14.62□□□□□ -0.07
TPM1-201ENST00000267996 RPS25P62851 125 aaKnown RBP14.62□□□□□ -0.07
TPM1-201ENST00000267996 CSNK2A1P68400 391 aaPredicted RBP14.62□□□□□ -0.07
TPM1-201ENST00000267996 CDC20Q12834 499 aa14.62□□□□□ -0.07
TPM1-201ENST00000267996 HYAL4Q2M3T9 481 aa14.62□□□□□ -0.07
TPM1-201ENST00000267996 WIPI1Q5MNZ9 446 aaPredicted RBP14.62□□□□□ -0.07
TPM1-201ENST00000267996 TMEM225Q6GV28 225 aa14.62□□□□□ -0.07
TPM1-201ENST00000267996 GGNQ86UU5 652 aa14.62□□□□□ -0.07
TPM1-201ENST00000267996 ZFP41Q8N8Y5 198 aa14.62□□□□□ -0.07
TPM1-201ENST00000267996 MRPL48Q96GC5 212 aaKnown RBP14.62□□□□□ -0.07
TPM1-201ENST00000267996 SCMH1Q96GD3 660 aa14.62□□□□□ -0.07
TPM1-201ENST00000267996 SFXN2Q96NB2 322 aa14.62□□□□□ -0.07
TPM1-201ENST00000267996 TRIM36Q9NQ86 728 aa14.62□□□□□ -0.07
TPM1-201ENST00000267996 B4GALT7Q9UBV7 327 aa14.62□□□□□ -0.07
TPM1-201ENST00000267996 SSR3Q9UNL2 185 aa14.62□□□□□ -0.07
TPM1-201ENST00000267996 SIRT4Q9Y6E7 314 aaPredicted RBP14.62□□□□□ -0.07
TPM1-201ENST00000267996 TVP23AA6NH52 213 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 VGLL3A8MV65 326 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 E9PI62 339 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 ZNF670-ZNF695F2Z2N8 137 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 J3QLW9 94 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 TRAPPC6AO75865 159 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 ZNF19P17023 458 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 CELP19835 753 aa14.61□□□□□ -0.07
TPM1-201ENST00000267996 PTGS2P35354 604 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms