RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 CCDC59Q9P031 241 aaKnown RBP12.72□□□□□ -0.37
CDH1-201ENST00000261769 FBXL3Q9UKT7 428 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 COA3Q9Y2R0 106 aaPredicted RBP12.72□□□□□ -0.37
CDH1-201ENST00000261769 B3GALT1Q9Y5Z6 326 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 SMAD9O15198 467 aaKnown RBP12.72□□□□□ -0.37
CDH1-201ENST00000261769 NXPH2O95156 264 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 CD40LGP29965 261 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 IDH3GP51553 393 aaPredicted RBP12.72□□□□□ -0.37
CDH1-201ENST00000261769 NCS1P62166 190 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 SLC22A25Q6T423 547 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 SLC16A9Q7RTY1 509 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 GGHQ92820 318 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 RASD2Q96D21 266 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 ZNF768Q9H5H4 540 aaKnown RBP12.72□□□□□ -0.37
CDH1-201ENST00000261769 ZFP64Q9NPA5 681 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 LANCL2Q9NS86 450 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 TBCCD1Q9NVR7 557 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 B3GNT2Q9NY97 397 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 CDHR4A6H8M9 788 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 OR8B8Q15620 311 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 ACKR1Q16570 336 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 NTRK2Q16620 822 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 PRTGQ2VWP7 1150 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 ESPNLQ6ZVH7 1005 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 VASH2Q86V25 355 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 ZNF350Q9GZX5 532 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 SLC6A15Q9H2J7 730 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 CD300AQ9UGN4 299 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 TCFL5Q9UL49 500 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 DLEC1Q9Y238 1755 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 P2RX6O15547 441 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 HPP00738 406 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 TBXA2RP21731 343 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 DCXRQ7Z4W1 244 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 IL1F10Q8WWZ1 152 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 ST6GALNAC5Q9BVH7 336 aa12.72□□□□□ -0.37
CDH1-201ENST00000261769 MOV10Q9HCE1 1003 aaKnown RBP12.72□□□□□ -0.37
CDH1-201ENST00000261769 A0A1W2PQL4 384 aaPredicted RBP12.71□□□□□ -0.37
CDH1-201ENST00000261769 GFRA3O60609 400 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 RAB3DO95716 219 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 ALDOBP05062 364 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 TFPTP0C1Z6 253 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 H2AFB2P0C5Z0 115 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 SP9P0CG40 484 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 CDK2P24941 298 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 FXYD4P59646 89 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 RELAQ04206 551 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 AGERQ15109 404 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 P2RY14Q15391 338 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 ZNF425Q6IV72 752 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 BORAQ6PGQ7 559 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 STX12Q86Y82 276 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 GDPD1Q8N9F7 314 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 BRIX1Q8TDN6 353 aaKnown RBP12.71□□□□□ -0.37
CDH1-201ENST00000261769 KISS1RQ969F8 398 aaPredicted RBP12.71□□□□□ -0.37
CDH1-201ENST00000261769 ZNF582Q96NG8 517 aaPredicted RBP12.71□□□□□ -0.37
CDH1-201ENST00000261769 TMEM165Q9HC07 324 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 PMF1-BGLAPU3KQ54 211 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 ASXL3Q9C0F0 2248 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 OR2W5A6NFC9 320 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 ZNF736B4DX44 427 aaPredicted RBP12.71□□□□□ -0.37
CDH1-201ENST00000261769 CSF1P09603 554 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 LGALS4P56470 323 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 TEKQ02763 1124 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 ZNF181Q2M3W8 571 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 OR56B1Q8NGI3 324 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 SNAPC3Q92966 411 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 FAIMQ9NVQ4 179 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 ALG5Q9Y673 324 aa12.71□□□□□ -0.37
CDH1-201ENST00000261769 ZNF780AO75290 641 aaPredicted RBP12.71□□□□□ -0.38
CDH1-201ENST00000261769 NKX2-2O95096 273 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 TK1P04183 234 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 CCL4P13236 92 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 ABCD3P28288 659 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 SDHAP31040 664 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 IKZF1Q13422 519 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 Q499Y3 187 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 PXKQ7Z7A4 578 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 DNAJC22Q8N4W6 341 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 DTX3Q8N9I9 347 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 PFN4Q8NHR9 129 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 KCNG3Q8TAE7 436 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 PHYHIPQ92561 330 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 SLC22A11Q9NSA0 550 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 RDH8Q9NYR8 311 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 KRBA1A5PL33 1030 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 CREBL2O60519 120 aaPredicted RBP12.71□□□□□ -0.38
CDH1-201ENST00000261769 PRAMEF9Q5VWM5 478 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 SGPP2Q8IWX5 399 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 SPARTQ8N0X7 666 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 DMRTB1Q96MA1 342 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 CMSS1Q9BQ75 279 aaKnown RBP12.71□□□□□ -0.38
CDH1-201ENST00000261769 STEAP1Q9UHE8 339 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 MED16Q9Y2X0 877 aa12.71□□□□□ -0.38
CDH1-201ENST00000261769 B4E171 279 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 PIP5K1CO60331 668 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 RAB40ALP0C0E4 278 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 AKR1C4P17516 323 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 PTGS2P35354 604 aa12.7□□□□□ -0.38
CDH1-201ENST00000261769 TSPAN7P41732 249 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms