RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 GZMMP51124 257 aa16.41■□□□□ 0.22
TM6SF1-201ENST00000258909 RAB1AP62820 205 aa16.41■□□□□ 0.22
TM6SF1-201ENST00000258909 ZNF627Q7L945 461 aa16.41■□□□□ 0.22
TM6SF1-201ENST00000258909 PHC2Q8IXK0 858 aa16.41■□□□□ 0.22
TM6SF1-201ENST00000258909 FGFBP3Q8TAT2 258 aa16.41■□□□□ 0.22
TM6SF1-201ENST00000258909 SOX7Q9BT81 388 aa16.41■□□□□ 0.22
TM6SF1-201ENST00000258909 TPK1Q9H3S4 243 aa16.41■□□□□ 0.22
TM6SF1-201ENST00000258909 NANSQ9NR45 359 aa16.41■□□□□ 0.22
TM6SF1-201ENST00000258909 TMEM160Q9NX00 188 aa16.41■□□□□ 0.22
TM6SF1-201ENST00000258909 CMAHPQ9Y471 501 aa16.41■□□□□ 0.22
TM6SF1-201ENST00000258909 LYNX1G3V0Z9 82 aa16.4■□□□□ 0.22
TM6SF1-201ENST00000258909 RNF13O43567 381 aa16.4■□□□□ 0.22
TM6SF1-201ENST00000258909 LYNX1P0DP58 116 aa16.4■□□□□ 0.22
TM6SF1-201ENST00000258909 UMPSP11172 480 aa16.4■□□□□ 0.22
TM6SF1-201ENST00000258909 ZNF35P13682 527 aa16.4■□□□□ 0.22
TM6SF1-201ENST00000258909 TNFRSF1BP20333 461 aa16.4■□□□□ 0.22
TM6SF1-201ENST00000258909 VMACQ2NL98 169 aa16.4■□□□□ 0.22
TM6SF1-201ENST00000258909 RABL3Q5HYI8 236 aa16.4■□□□□ 0.22
TM6SF1-201ENST00000258909 FAM166AQ6J272 317 aa16.4■□□□□ 0.22
TM6SF1-201ENST00000258909 NANOGP8Q6NSW7 305 aa16.4■□□□□ 0.22
TM6SF1-201ENST00000258909 SKA3Q8IX90 412 aa16.4■□□□□ 0.22
TM6SF1-201ENST00000258909 TSPEARQ8WU66 669 aa16.4■□□□□ 0.22
TM6SF1-201ENST00000258909 TMEM54Q969K7 222 aa16.4■□□□□ 0.22
TM6SF1-201ENST00000258909 REPIN1Q9BWE0 567 aaKnown RBP16.4■□□□□ 0.22
TM6SF1-201ENST00000258909 TMEM120AQ9BXJ8 343 aa16.4■□□□□ 0.22
TM6SF1-201ENST00000258909 MRPL37Q9BZE1 423 aaKnown RBP16.4■□□□□ 0.22
TM6SF1-201ENST00000258909 NANOGQ9H9S0 305 aa16.4■□□□□ 0.22
TM6SF1-201ENST00000258909 KCNS2Q9ULS6 477 aa16.4■□□□□ 0.22
TM6SF1-201ENST00000258909 PHF1O43189 567 aaPredicted RBP16.39■□□□□ 0.21
TM6SF1-201ENST00000258909 RAB36O95755 333 aa16.39■□□□□ 0.21
TM6SF1-201ENST00000258909 ZNF23P17027 643 aa16.39■□□□□ 0.21
TM6SF1-201ENST00000258909 RAB39AQ14964 217 aa16.39■□□□□ 0.21
TM6SF1-201ENST00000258909 TRMT5Q32P41 509 aaKnown RBP16.39■□□□□ 0.21
TM6SF1-201ENST00000258909 INTS11Q5TA45 600 aaKnown RBP16.39■□□□□ 0.21
TM6SF1-201ENST00000258909 SNX32Q86XE0 403 aa16.39■□□□□ 0.21
TM6SF1-201ENST00000258909 SLC30A8Q8IWU4 369 aa16.39■□□□□ 0.21
TM6SF1-201ENST00000258909 OR6X1Q8NH79 312 aa16.39■□□□□ 0.21
TM6SF1-201ENST00000258909 NEU4Q8WWR8 484 aaPredicted RBP16.39■□□□□ 0.21
TM6SF1-201ENST00000258909 SYT3Q9BQG1 590 aa16.39■□□□□ 0.21
TM6SF1-201ENST00000258909 PRSS27Q9BQR3 290 aa16.39■□□□□ 0.21
TM6SF1-201ENST00000258909 VIPAS39Q9H9C1 493 aa16.39■□□□□ 0.21
TM6SF1-201ENST00000258909 GLTPQ9NZD2 209 aa16.39■□□□□ 0.21
TM6SF1-201ENST00000258909 FZR1Q9UM11 496 aa16.39■□□□□ 0.21
TM6SF1-201ENST00000258909 SH3GLB1Q9Y371 365 aa16.39■□□□□ 0.21
TM6SF1-201ENST00000258909 SHOX2O60902 331 aaPredicted RBP16.38■□□□□ 0.21
TM6SF1-201ENST00000258909 TGFAP01135 160 aa16.38■□□□□ 0.21
TM6SF1-201ENST00000258909 ERCC1P07992 297 aaPredicted RBP16.38■□□□□ 0.21
TM6SF1-201ENST00000258909 TCN1P20061 433 aaPredicted RBP16.38■□□□□ 0.21
TM6SF1-201ENST00000258909 IL2RGP31785 369 aa16.38■□□□□ 0.21
TM6SF1-201ENST00000258909 ZP4Q12836 540 aa16.38■□□□□ 0.21
TM6SF1-201ENST00000258909 FAM120AOSQ5T036 256 aa16.38■□□□□ 0.21
TM6SF1-201ENST00000258909 LRFN4Q6PJG9 635 aa16.38■□□□□ 0.21
TM6SF1-201ENST00000258909 LRP11Q86VZ4 500 aa16.38■□□□□ 0.21
TM6SF1-201ENST00000258909 ZNF540Q8NDQ6 660 aa16.38■□□□□ 0.21
TM6SF1-201ENST00000258909 ZNF566Q969W8 418 aa16.38■□□□□ 0.21
TM6SF1-201ENST00000258909 MRPL24Q96A35 216 aaKnown RBP16.38■□□□□ 0.21
TM6SF1-201ENST00000258909 SH3GL3Q99963 347 aa16.38■□□□□ 0.21
TM6SF1-201ENST00000258909 MEPEQ9NQ76 525 aaPredicted RBP16.38■□□□□ 0.21
TM6SF1-201ENST00000258909 LPAR3Q9UBY5 353 aa16.38■□□□□ 0.21
TM6SF1-201ENST00000258909 FBXO9Q9UK97 447 aaPredicted RBP16.38■□□□□ 0.21
TM6SF1-201ENST00000258909 BLOC1S5-TXNDC5H3BN57 136 aa16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 SASH3O75995 380 aa16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 UBL3O95164 117 aa16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 HIST1H2ABP04908 130 aa16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 ASAH2BP0C7U1 165 aa16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 H2AFXP16104 143 aaPredicted RBP16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 SRSF2Q01130 221 aaKnown RBP16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 CYLC2Q14093 348 aaPredicted RBP16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 GKAP1Q5VSY0 366 aaPredicted RBP16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 METTL21CQ5VZV1 264 aa16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 CCDC80Q76M96 950 aa16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 HIST3H2AQ7L7L0 130 aa16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 CARM1Q86X55 608 aa16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 ZNF584Q8IVC4 421 aa16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 SLC22A24Q8N4F4 322 aa16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 UBASH3BQ8TF42 649 aa16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 HIST1H2ACQ93077 130 aa16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 SLC25A44Q96H78 314 aaPredicted RBP16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 MPP4Q96JB8 637 aa16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 SIKE1Q9BRV8 207 aa16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 ZNF426Q9BUY5 554 aa16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 PCDHAC1Q9H158 963 aa16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 ZNF229Q9UJW7 825 aa16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 SPEF1Q9Y4P9 236 aa16.37■□□□□ 0.21
TM6SF1-201ENST00000258909 GIFP27352 417 aa16.36■□□□□ 0.21
TM6SF1-201ENST00000258909 GLRXP35754 106 aa16.36■□□□□ 0.21
TM6SF1-201ENST00000258909 ALDH3B1P43353 468 aa16.36■□□□□ 0.21
TM6SF1-201ENST00000258909 SEC24CP53992 1094 aa16.36■□□□□ 0.21
TM6SF1-201ENST00000258909 MYBPC1Q00872 1141 aa16.36■□□□□ 0.21
TM6SF1-201ENST00000258909 GALK2Q01415 458 aa16.36■□□□□ 0.21
TM6SF1-201ENST00000258909 MAD2L1BPQ15013 274 aaPredicted RBP16.36■□□□□ 0.21
TM6SF1-201ENST00000258909 TRIP10Q15642 601 aa16.36■□□□□ 0.21
TM6SF1-201ENST00000258909 PIWIL3Q7Z3Z3 882 aaKnown RBP16.36■□□□□ 0.21
TM6SF1-201ENST00000258909 NANOGNBQ7Z5D8 188 aa16.36■□□□□ 0.21
TM6SF1-201ENST00000258909 NKAIN4Q8IVV8 208 aa16.36■□□□□ 0.21
TM6SF1-201ENST00000258909 ZNF786Q8N393 782 aa16.36■□□□□ 0.21
TM6SF1-201ENST00000258909 PFN4Q8NHR9 129 aa16.36■□□□□ 0.21
TM6SF1-201ENST00000258909 TMEM158Q8WZ71 300 aa16.36■□□□□ 0.21
TM6SF1-201ENST00000258909 LRRC58Q96CX6 371 aa16.36■□□□□ 0.21
TM6SF1-201ENST00000258909 SNX18Q96RF0 628 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms