RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ABHD17BQ5VST6 288 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 GPR139Q6DWJ6 353 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 JMJD6Q6NYC1 403 aaPredicted RBP16.97■□□□□ 0.31
TRIM47-201ENST00000254816 ZNF322Q6U7Q0 402 aaPredicted RBP16.97■□□□□ 0.31
TRIM47-201ENST00000254816 LINC00696Q6ZRV3 163 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 H1FNTQ75WM6 255 aaPredicted RBP16.97■□□□□ 0.31
TRIM47-201ENST00000254816 SPATC1Q76KD6 591 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 GDPD3Q7L5L3 318 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 KLBQ86Z14 1044 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 ARIH2OSQ8N7S6 290 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 OR6S1Q8NH40 331 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 UFD1Q92890 307 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 SLC25A46Q96AG3 418 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 NXPE2Q96DL1 559 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 SYT4Q9H2B2 425 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 LRFN1Q9P244 771 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 V9GYH0 126 aa16.97■□□□□ 0.31
TRIM47-201ENST00000254816 EIF1P41567 113 aaKnown RBP16.96■□□□□ 0.31
TRIM47-201ENST00000254816 AIMP2Q13155 320 aaKnown RBP16.96■□□□□ 0.31
TRIM47-201ENST00000254816 LINC01590Q5TEZ4 76 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 RAET1LQ5VY80 246 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 EGFL6Q8IUX8 553 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 OR6V1Q8N148 313 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 ZNF511Q8NB15 262 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 C5orf34Q96MH7 638 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 SIGLEC12Q96PQ1 595 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 CNN2Q99439 309 aaKnown RBP16.96■□□□□ 0.31
TRIM47-201ENST00000254816 ALG12Q9BV10 488 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 FAM117AQ9C073 453 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 TXNIPQ9H3M7 391 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 CHST11Q9NPF2 352 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 PLA2G3Q9NZ20 509 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 SF3B6Q9Y3B4 125 aaKnown RBP16.96■□□□□ 0.31
TRIM47-201ENST00000254816 PINLYPA6NC86 204 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 MAGEB4O15481 346 aaPredicted RBP16.96■□□□□ 0.31
TRIM47-201ENST00000254816 GLCEO94923 617 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 GPANK1O95872 356 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 ADH6P28332 368 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 MAP2K6P52564 334 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 FABP5Q01469 135 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 SELENBP1Q13228 472 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 MADCAM1Q13477 382 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 GALEQ14376 348 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 GGTLC2Q14390 218 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.96■□□□□ 0.31
TRIM47-201ENST00000254816 LCN1P1Q5VSP4 162 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 TMPRSS11AQ6ZMR5 421 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 WDFY1Q8IWB7 410 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 GTPBP8Q8N3Z3 284 aaPredicted RBP16.96■□□□□ 0.31
TRIM47-201ENST00000254816 OR52N1Q8NH53 320 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 ZNF519Q8TB69 540 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 DCLRE1CQ96SD1 692 aaKnown RBP16.96■□□□□ 0.31
TRIM47-201ENST00000254816 ALKBH4Q9NXW9 302 aa16.96■□□□□ 0.31
TRIM47-201ENST00000254816 KIAA1549Q9HCM3 1950 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 A0A087WZY1 265 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 ARGFXA6NJG6 315 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 A6NL46 340 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 XKRYO14609 159 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 CBR3O75828 277 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 RENP00797 406 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 RFPL3SP0C7P2 107 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 SLC25A1P53007 311 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 CAV3P56539 151 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 OR2B6P58173 313 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 POU4F2Q12837 409 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 TPBGQ13641 420 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 MFSD13AQ14CX5 517 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 SLC35D3Q5M8T2 416 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 CCBE1Q6UXH8 406 aaPredicted RBP16.95■□□□□ 0.3
TRIM47-201ENST00000254816 TMPRSS7Q7RTY8 843 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 CLEC1AQ8NC01 280 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 HES7Q9BYE0 225 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 CCDC86Q9H6F5 360 aaKnown RBP16.95■□□□□ 0.3
TRIM47-201ENST00000254816 TEKT2Q9UIF3 430 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 CMAHPQ9Y471 501 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 GVINP1Q7Z2Y8 2422 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 A0A1W2PRG6 482 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 OR2M5A3KFT3 312 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 KLK2P20151 261 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 ZNF79Q15937 498 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 SLC35F2Q8IXU6 374 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 CELF2-AS1Q8N7Q2 184 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 SCAIQ8N9R8 606 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 FER1L6-AS2Q96M78 137 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 KCTD7Q96MP8 289 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 FOXN4Q96NZ1 517 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 IP6K3Q96PC2 410 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 ABCB9Q9NP78 766 aa16.95■□□□□ 0.3
TRIM47-201ENST00000254816 PLEKHB1Q9UF11 243 aaPredicted RBP16.95■□□□□ 0.3
TRIM47-201ENST00000254816 FAM186AA6NE01 2351 aa16.94■□□□□ 0.3
TRIM47-201ENST00000254816 TVP23AA6NH52 213 aa16.94■□□□□ 0.3
TRIM47-201ENST00000254816 SLC30A4O14863 429 aa16.94■□□□□ 0.3
TRIM47-201ENST00000254816 NEURL1O76050 574 aa16.94■□□□□ 0.3
TRIM47-201ENST00000254816 IL1AP01583 271 aa16.94■□□□□ 0.3
TRIM47-201ENST00000254816 PRKAR1AP10644 381 aa16.94■□□□□ 0.3
TRIM47-201ENST00000254816 TPTEP56180 551 aa16.94■□□□□ 0.3
TRIM47-201ENST00000254816 DEFA1P59665 94 aa16.94■□□□□ 0.3
TRIM47-201ENST00000254816 DEFA3P59666 94 aa16.94■□□□□ 0.3
TRIM47-201ENST00000254816 POU3F1Q03052 451 aaPredicted RBP16.94■□□□□ 0.3
TRIM47-201ENST00000254816 INSL4Q14641 139 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms