RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 ZFPM2Q8WW38 1151 aa17.2■□□□□ 0.34
SMARCC1-201ENST00000254480 MS4A6EQ96DS6 147 aa17.2■□□□□ 0.34
SMARCC1-201ENST00000254480 P2RY12Q9H244 342 aa17.2■□□□□ 0.34
SMARCC1-201ENST00000254480 IGHV3-15A0A0B4J1V0 119 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 CLDN24A6NM45 220 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 GSTP1P09211 210 aaKnown RBP17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 HES1Q14469 280 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 OGFOD3Q6PK18 319 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 OR11L1Q8NGX0 322 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 OR10K1Q8NGX5 313 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 HRASLS5Q96KN8 279 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 LTB4R2Q9NPC1 389 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 SHISA7A6NL88 538 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 RAB40ALP0C0E4 278 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 RPS27P42677 84 aaKnown RBP17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 DLX5P56178 289 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 NKX6-1P78426 367 aaPredicted RBP17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 ALKBH1Q13686 389 aaKnown RBP17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 MRPL41Q8IXM3 137 aaKnown RBP17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 RAB40AQ8WXH6 277 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 TOPAZ1Q8N9V7 1692 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 ZNF93P35789 620 aaPredicted RBP17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 LRRC56Q8IYG6 542 aaPredicted RBP17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 OR56B1Q8NGI3 324 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 UFSP2Q9NUQ7 469 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 ZNF814B7Z6K7 855 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 GUSBP08236 651 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 TAS2R46P59540 309 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 NKAIN1Q4KMZ8 207 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 YOD1Q5VVQ6 348 aaPredicted RBP17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 TSLPQ969D9 159 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 SAGE1Q9NXZ1 904 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 HMX2A2RU54 273 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 CHRNB4P30926 498 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 TSFMP43897 325 aaKnown RBP17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 GPLD1P80108 840 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 Q499Y3 187 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 ANKRD34AQ69YU3 496 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 SLC46A3Q7Z3Q1 461 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 CELF2-AS1Q8N7Q2 184 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 LIN37Q96GY3 246 aaPredicted RBP17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 UBQLN3Q9H347 655 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 STEAP1Q9UHE8 339 aa17.19■□□□□ 0.34
SMARCC1-201ENST00000254480 MTHFD2P13995 350 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 ESCO2Q56NI9 601 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 RBMXL1Q96E39 390 aaKnown RBP17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 OR11A1Q9GZK7 315 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 A8MXE2 369 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 CLDN1O95832 211 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 ST6GAL1P15907 406 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 F2RL1P55085 397 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 DPY19L2P2Q6ZN68 376 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 NXT1Q9UKK6 140 aaKnown RBP17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 MOKQ9UQ07 419 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 K7EPK0 472 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 SIX6O95475 246 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 SCG5P05408 212 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 NME2P22392 152 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 TDHQ8IZJ6 230 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 FAM71E2Q8N5Q1 922 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 OR4N2Q8NGD1 307 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 ELSPBP1Q96BH3 223 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 OR52A1Q9UKL2 312 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 MSTNO14793 375 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 SULT1B1O43704 296 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 FGF17O60258 216 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 NPY4RP50391 375 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 AKR1C1Q04828 323 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 C9orf152Q5JTZ5 239 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 OR7G1Q8NGA0 311 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 MZB1Q8WU39 189 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 SDHAF2Q9NX18 166 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 HRH3Q9Y5N1 445 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 PHF1O43189 567 aaPredicted RBP17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 HTR1FP30939 366 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 ZNF385BQ569K4 471 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 PELI3Q8N2H9 469 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 ST7LQ8TDW4 575 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 SLC35A4Q96G79 324 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 SLC25A31Q9H0C2 315 aa17.18■□□□□ 0.34
SMARCC1-201ENST00000254480 M0R082 166 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 CHRNB1P11230 501 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 CCR2P41597 374 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 BAXQ07812 192 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 RHOXF1Q8NHV9 184 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 MKRN2Q9H000 416 aaKnown RBP17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 GPR173Q9NS66 373 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 TIAM2Q8IVF5 1701 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 PRKACBP22694 351 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 TMEM265A0A087WTH1 108 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 A0A096LPE4 126 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 A0A1W2PPZ6 126 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 P2RX6O15547 441 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 TMPRSS11DO60235 418 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 CD14P08571 375 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 SNCAP37840 140 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 SLC19A1P41440 591 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 MISPQ8IVT2 679 aa17.17■□□□□ 0.34
SMARCC1-201ENST00000254480 SIAH3Q8IW03 269 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms