RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 TACSTD2P09758 323 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 ADRA2CP18825 462 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 TDGQ13569 410 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 DYRK1AQ13627 763 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 CDNFQ49AH0 187 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 FAM74A3Q4VXF1 159 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 ULK3Q6PHR2 472 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 ADGRG3Q86Y34 549 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 PM20D2Q8IYS1 436 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 AVL9Q8NBF6 648 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 OR2AK2Q8NG84 335 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 HAVCR2Q8TDQ0 301 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 C2CD4CQ8TF44 421 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 PIPOXQ9P0Z9 390 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 KCNG2Q9UJ96 466 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 ASXL3Q9C0F0 2248 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 KANTRA0A1W2PQU2 76 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 XKRYO14609 159 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 HCRTR2O43614 444 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 IGKV1D-16P01601 117 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 DCNP07585 359 aaKnown RBP10.91□□□□□ -0.66
USHBP1-201ENST00000252597 PPP3CBP16298 524 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 DIO1P49895 249 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 POU4F2Q12837 409 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 KLHL26Q53HC5 615 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 ZCCHC12Q6PEW1 402 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 KRT77Q7Z794 578 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 ETFBKMTQ8IXQ9 262 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 RAB7BQ96AH8 199 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 DMRTA2Q96SC8 542 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 ADOQ96SZ5 270 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 GFI1Q99684 422 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 TCEAL2Q9H3H9 227 aaPredicted RBP10.91□□□□□ -0.66
USHBP1-201ENST00000252597 Q9N2J8 555 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 IFT46Q9NQC8 304 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 A0A0B4J2E0 115 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 A0A1B0GUH1 482 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 A0A1B0GX12 115 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 C2orf72A6NCS6 295 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 PRAF2O60831 178 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 LINC00271P0C7V0 271 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 ERGP11308 486 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 Q499Y3 187 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 C1QL3Q5VWW1 255 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 SAMD14Q8IZD0 417 aaPredicted RBP10.91□□□□□ -0.66
USHBP1-201ENST00000252597 STEAP2Q8NFT2 490 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 THAP3Q8WTV1 239 aaPredicted RBP10.91□□□□□ -0.66
USHBP1-201ENST00000252597 RGP1Q92546 391 aaPredicted RBP10.91□□□□□ -0.66
USHBP1-201ENST00000252597 HGDQ93099 445 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 MMABQ96EY8 250 aaPredicted RBP10.91□□□□□ -0.66
USHBP1-201ENST00000252597 SPACA5Q96QH8 159 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 TEX101Q9BY14 249 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 ELOVL3Q9HB03 270 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 TAS2R5Q9NYW4 299 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 SLC22A7Q9Y694 548 aa10.91□□□□□ -0.66
USHBP1-201ENST00000252597 TRAV1-2A0A0B4J238 106 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 TMEM235A6NFC5 223 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 ZNF705EA8MWA4 302 aaPredicted RBP10.9□□□□□ -0.66
USHBP1-201ENST00000252597 G3V3Q6 166 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 CDC40O60508 579 aaKnown RBP eCLIP10.9□□□□□ -0.66
USHBP1-201ENST00000252597 RBMS2Q15434 407 aaKnown RBP10.9□□□□□ -0.66
USHBP1-201ENST00000252597 OVCH1Q7RTY7 1134 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 PAQR8Q8TEZ7 354 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 HERVK_113Q902F9 699 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 CMBLQ96DG6 245 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 OR2A5Q96R48 311 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 TREM1Q9NP99 234 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 PRR13Q9NZ81 148 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 FRRS1LQ9P0K9 344 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 PLCL2Q9UPR0 1127 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 HEATR5AQ86XA9 2040 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 CARNS1A5YM72 827 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 BRINP1O60477 761 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 HLA-AP01891 365 aaKnown RBP10.9□□□□□ -0.66
USHBP1-201ENST00000252597 THBS1P07996 1170 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 CTSEP14091 401 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 ALKBH1Q13686 389 aaKnown RBP10.9□□□□□ -0.66
USHBP1-201ENST00000252597 FCRL6Q6DN72 434 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 SHISA6Q6ZSJ9 500 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 GPAT4Q86UL3 456 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 SLC35F3Q8IY50 421 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 DND1Q8IYX4 353 aaKnown RBP10.9□□□□□ -0.66
USHBP1-201ENST00000252597 SLC25A28Q96A46 364 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 AMELYQ99218 206 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 SLC6A15Q9H2J7 730 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 PCDHB16Q9NRJ7 776 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 HPF1Q9NWY4 346 aa10.9□□□□□ -0.66
USHBP1-201ENST00000252597 PLSCR5A0PG75 271 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 FADS1O60427 444 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 PTP4A3O75365 173 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 FARS2O95363 451 aaKnown RBP10.89□□□□□ -0.67
USHBP1-201ENST00000252597 CELA2BP08218 269 aaPredicted RBP10.89□□□□□ -0.67
USHBP1-201ENST00000252597 GIPP09681 153 aaPredicted RBP10.89□□□□□ -0.67
USHBP1-201ENST00000252597 HOXB2P14652 356 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 PI3P19957 117 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 DPP4P27487 766 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 DNASE1L1P49184 302 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 FOXL2P58012 376 aa10.89□□□□□ -0.67
USHBP1-201ENST00000252597 ILF3Q12906 894 aaKnown RBP eCLIP10.89□□□□□ -0.67
USHBP1-201ENST00000252597 ETFDHQ16134 617 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms