RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 RNLSQ5VYX0 342 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 NIPAL3Q6P499 406 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 PLBD1Q6P4A8 553 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 LEG1Q6P5S2 330 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 KDM8Q8N371 416 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 BPIFB6Q8NFQ5 453 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 DNAJA3Q96EY1 480 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 RBP7Q96R05 134 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 NMNAT3Q96T66 252 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 MYCBPQ99417 103 aaPredicted RBP11.52□□□□□ -0.57
LSM8-201ENST00000249299 TEAD3Q99594 435 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 TUBA1CQ9BQE3 449 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 PRRG4Q9BZD6 226 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 RACGAP1Q9H0H5 632 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 CLCF1Q9UBD9 225 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 CAMK2AQ9UQM7 478 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 GPR52Q9Y2T5 361 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 PCDHGB5Q9Y5G0 923 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 FLVCR1Q9Y5Y0 555 aa11.52□□□□□ -0.57
LSM8-201ENST00000249299 A0A087WXM4 84 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 SLC22A23A1A5C7 686 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 OR6C68A6NDL8 312 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 SLC22A20A6NK97 555 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 FIGNL2A6NMB9 653 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 TRMUO75648 421 aaKnown RBP11.51□□□□□ -0.57
LSM8-201ENST00000249299 YES1P07947 543 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 PGA4P0DJD7 388 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 PGA3P0DJD8 388 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 DCKP27707 260 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 BIDP55957 195 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 GGTLC2Q14390 218 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 RIPPLY2Q5TAB7 128 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 EEF1A1P5Q5VTE0 462 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 NSUN5P2Q63ZY6 315 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 OR2A2Q6IF42 318 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 ZIC4Q8N9L1 334 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 POMGNT2Q8NAT1 580 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 SDR9C7Q8NEX9 313 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 ZNF845Q96IR2 970 aaPredicted RBP11.51□□□□□ -0.57
LSM8-201ENST00000249299 TXNDC15Q96J42 360 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 ZFP3Q96NJ6 502 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 JAM3Q9BX67 310 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 DNAJC27Q9NZQ0 273 aa11.51□□□□□ -0.57
LSM8-201ENST00000249299 TLN1Q9Y490 2541 aaKnown RBP11.51□□□□□ -0.57
LSM8-201ENST00000249299 TPRP12270 2363 aaKnown RBP11.5□□□□□ -0.57
LSM8-201ENST00000249299 SLC35F4A4IF30 521 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 TRIM64CA6NLI5 447 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 RAMP1O60894 148 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 FAM20BO75063 409 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 GLCEO94923 617 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 FADS2O95864 444 aaKnown RBP11.5□□□□□ -0.57
LSM8-201ENST00000249299 PLGP00747 810 aaPredicted RBP11.5□□□□□ -0.57
LSM8-201ENST00000249299 CRHP06850 196 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 DBTP11182 482 aaKnown RBP11.5□□□□□ -0.57
LSM8-201ENST00000249299 EDN3P14138 238 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 SPI1P17947 270 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 FMO3P31513 532 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 ZNF91Q05481 1191 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 RBPJQ06330 500 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 ZNF773Q6PK81 442 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 PRSS48Q7RTY5 328 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 MCEMP1Q8IX19 187 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 CISD2Q8N5K1 135 aaKnown RBP11.5□□□□□ -0.57
LSM8-201ENST00000249299 ZNF540Q8NDQ6 660 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 NOXO1Q8NFA2 376 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 FNDC9Q8TBE3 224 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 ROBO4Q8WZ75 1007 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 NMD3Q96D46 503 aaKnown RBP11.5□□□□□ -0.57
LSM8-201ENST00000249299 SNRNP40Q96DI7 357 aaKnown RBP11.5□□□□□ -0.57
LSM8-201ENST00000249299 CRELD1Q96HD1 420 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 GMPPAQ96IJ6 420 aaPredicted RBP11.5□□□□□ -0.57
LSM8-201ENST00000249299 OR2M2Q96R28 347 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 SIGLEC11Q96RL6 698 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 MNTQ99583 582 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 TM9SF2Q99805 663 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 FGF20Q9NP95 211 aaPredicted RBP11.5□□□□□ -0.57
LSM8-201ENST00000249299 INPP5EQ9NRR6 644 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 MED29Q9NX70 200 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 ING1Q9UK53 422 aaPredicted RBP11.5□□□□□ -0.57
LSM8-201ENST00000249299 EXOGQ9Y2C4 368 aaKnown RBP11.5□□□□□ -0.57
LSM8-201ENST00000249299 ZNF835Q9Y2P0 537 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 ZZEF1O43149 2961 aa11.5□□□□□ -0.57
LSM8-201ENST00000249299 DSPP15924 2871 aaKnown RBP11.5□□□□□ -0.57
LSM8-201ENST00000249299 MAP1BP46821 2468 aaKnown RBP11.5□□□□□ -0.57
LSM8-201ENST00000249299 MPDZO75970 2070 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 PKD1L2Q7Z442 2459 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 FAM183AA6NL82 134 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 M0R129 80 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 XPNPEP2O43895 674 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 SLC43A1O75387 559 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 SERPINI2O75830 405 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 CNOT4O95628 575 aaKnown RBP11.49□□□□□ -0.57
LSM8-201ENST00000249299 HRGP04196 525 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 RPSAP08865 295 aaKnown RBP11.49□□□□□ -0.57
LSM8-201ENST00000249299 MLLT10P55197 1068 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 CLDN17P56750 224 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 CLRN1P58418 232 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 GLO1Q04760 184 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 APOFQ13790 326 aa11.49□□□□□ -0.57
LSM8-201ENST00000249299 SMN1Q16637 294 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms