RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 ZNF701Q9NV72 531 aaPredicted RBP11.15□□□□□ -0.62
VPREB3-201ENST00000248948 RHCGQ9UBD6 479 aa11.15□□□□□ -0.62
VPREB3-201ENST00000248948 FAM32AQ9Y421 112 aaKnown RBP11.15□□□□□ -0.62
VPREB3-201ENST00000248948 A0A087WUU8 490 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 A0A096LPE4 126 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 IGHV1-18A0A0C4DH31 117 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 A0A1W2PPZ6 126 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 ARHGEF9O43307 516 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 SAGP10523 405 aaPredicted RBP11.14□□□□□ -0.63
VPREB3-201ENST00000248948 ARR3P36575 388 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 AQP2P41181 271 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 PTH2RP49190 550 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 ADAM8P78325 824 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 VLDLRP98155 873 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 HIST3H3Q16695 136 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 ALG10Q5BKT4 473 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 Q5PR19 223 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 FAM205BPQ63HN1 556 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 ZNF544Q6NX49 715 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 PRSS57Q6UWY2 283 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 TMPRSS11FQ6ZWK6 438 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 WDFY1Q8IWB7 410 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 NEUROG1Q92886 237 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 ZNF837Q96EG3 531 aaPredicted RBP11.14□□□□□ -0.63
VPREB3-201ENST00000248948 PYURFQ96I23 114 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 NSL1Q96IY1 281 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 NDEL1Q9GZM8 345 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 DENND2DQ9H6A0 471 aaPredicted RBP11.14□□□□□ -0.63
VPREB3-201ENST00000248948 SMURF2Q9HAU4 748 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 KRCC1Q9NPI7 259 aaPredicted RBP11.14□□□□□ -0.63
VPREB3-201ENST00000248948 CISD1Q9NZ45 108 aaKnown RBP11.14□□□□□ -0.63
VPREB3-201ENST00000248948 GLTPQ9NZD2 209 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 ACTR3BQ9P1U1 418 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 POU2F3Q9UKI9 436 aa11.14□□□□□ -0.63
VPREB3-201ENST00000248948 PRPF19Q9UMS4 504 aaKnown RBP11.14□□□□□ -0.63
VPREB3-201ENST00000248948 EFCAB9A8MZ26 197 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 B2RBV5 119 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 hCG_2039718K7EN88 272 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 OVOL3O00110 214 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 SEC14L2O76054 403 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 CRYAAP02489 173 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 F13BP05160 661 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 SOD3P08294 240 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 B4GALT1P15291 398 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 CBR1P16152 277 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 MAKP20794 623 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 ZNF133P52736 654 aaPredicted RBP11.13□□□□□ -0.63
VPREB3-201ENST00000248948 CLRN1P58418 232 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 NKX6-1P78426 367 aaPredicted RBP11.13□□□□□ -0.63
VPREB3-201ENST00000248948 PGGHGQ32M88 737 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 FGD3Q5JSP0 725 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 ARMC4Q5T2S8 1044 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 B3GLCTQ6Y288 498 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 ZNF813Q6ZN06 617 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 RRM2BQ7LG56 351 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 CDK20Q8IZL9 346 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 OR13C2Q8NGS9 318 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 MOSPD2Q8NHP6 518 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 FNDC8Q8TC99 324 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 SLC7A13Q8TCU3 470 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 POP5Q969H6 163 aaKnown RBP11.13□□□□□ -0.63
VPREB3-201ENST00000248948 MCUR1Q96AQ8 359 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 PERPQ96FX8 193 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 DHRS9Q9BPW9 319 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 KCNS3Q9BQ31 491 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 TRAF4Q9BUZ4 470 aaPredicted RBP11.13□□□□□ -0.63
VPREB3-201ENST00000248948 MRPL13Q9BYD1 178 aaKnown RBP11.13□□□□□ -0.63
VPREB3-201ENST00000248948 C1orf21Q9H246 121 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 TXNIPQ9H3M7 391 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 FBXL3Q9UKT7 428 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 LAMP3Q9UQV4 416 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 POFUT2Q9Y2G5 429 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 V9GYQ6 96 aa11.13□□□□□ -0.63
VPREB3-201ENST00000248948 E7EQL1 145 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 ATP6V1G2-DDX39BF2Z307 99 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 UBL3O95164 117 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 FABP3P05413 133 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 CECR9P0C854 216 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 ACADSP16219 412 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 FUT4P22083 530 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 GPR4P46093 362 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 LIMS1P48059 325 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 SMIM11AP58511 58 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 TUBA1BP68363 451 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 TUBA4AP68366 448 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 LSM11P83369 360 aaKnown RBP eCLIP11.12□□□□□ -0.63
VPREB3-201ENST00000248948 NAAAQ02083 359 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 FOXD4Q12950 439 aaPredicted RBP11.12□□□□□ -0.63
VPREB3-201ENST00000248948 ETFDHQ16134 617 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 GSG1Q2KHT4 349 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 IQCCQ4KMZ1 466 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 C10orf128Q5T292 105 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 AGAP6Q5VW22 663 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 LCN8Q6JVE9 175 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 TUBA1AQ71U36 451 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 PIWIL3Q7Z3Z3 882 aaKnown RBP11.12□□□□□ -0.63
VPREB3-201ENST00000248948 DPPA2Q7Z7J5 298 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 OAFQ86UD1 273 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 LRRC75AQ8NAA5 344 aa11.12□□□□□ -0.63
VPREB3-201ENST00000248948 BCAS4Q8TDM0 211 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms