RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 HAVCR2Q8TDQ0 301 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 RIT1Q92963 219 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 SGTBQ96EQ0 304 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 RNF170Q96K19 258 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 C4orf36Q96KX1 117 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 PGLYRP3Q96LB9 341 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 GPX7Q96SL4 187 aaPredicted RBP7.13□□□□□ -1.27
CXCR4-201ENST00000241393 OR51V1Q9H2C8 321 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 UCK1Q9HA47 277 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 SLC28A3Q9HAS3 691 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 Q9N2J8 555 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 B3GAT2Q9NPZ5 323 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 RPS6KB2Q9UBS0 482 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 FANCMQ8IYD8 2048 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 ATG2BQ96BY7 2078 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 ARHGEF17Q96PE2 2063 aaPredicted RBP7.13□□□□□ -1.27
CXCR4-201ENST00000241393 CACNA1IQ9P0X4 2223 aa7.13□□□□□ -1.27
CXCR4-201ENST00000241393 TRAV27A0A087WT01 109 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 A0A087WUJ7 227 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 A0A0G2JK05 382 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 TCRBV21S2A2A0A5A6 115 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 A8MU76 341 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 CLDN4O14493 209 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 SCO2O43819 266 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 GPRIN2O60269 458 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 REM1O75628 298 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 NSA2O95478 260 aaKnown RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 CSF2P04141 144 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 IGHV4-34P06331 123 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 PSKH1P11801 424 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 APEHP13798 732 aaKnown RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 SHC1P29353 583 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 SLC6A1P30531 599 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 PITPNBP48739 271 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 GBX2P52951 348 aaPredicted RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 CRYZQ08257 329 aaKnown RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 FUT7Q11130 342 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 CDONQ4KMG0 1287 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 ACSM3Q53FZ2 586 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 HSD17B12Q53GQ0 312 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 IDNKQ5T6J7 187 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 FAAH2Q6GMR7 532 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 RPL22L1Q6P5R6 122 aaKnown RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 CEACAM19Q7Z692 300 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 TAF8Q7Z7C8 310 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 NR2C2APQ86WQ0 139 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 C7orf57Q8NEG2 295 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 OR14A16Q8NHC5 309 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 RPLP0P6Q8NHW5 317 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 GRPEL2Q8TAA5 225 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 GRHL3Q8TE85 626 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 PATE1Q8WXA2 126 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 RFT1Q96AA3 541 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 SMIM19Q96E16 107 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 RBM18Q96H35 190 aaKnown RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 ZNF285Q96NJ3 590 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 TNFRSF13CQ96RJ3 184 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 CNN2Q99439 309 aaKnown RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 C7orf50Q9BRJ6 194 aaKnown RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 GON7Q9BXV9 100 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 KRTAP4-8Q9BYQ9 185 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 CHRNA10Q9GZZ6 450 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 CD93Q9NPY3 652 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 ZNF275Q9NSD4 429 aaPredicted RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 DNAJB11Q9UBS4 358 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 PRODH2Q9UF12 536 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 NUFIP1Q9UHK0 495 aaKnown RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 RASD1Q9Y272 281 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 RBMX2Q9Y388 322 aaKnown RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 MKI67P46013 3256 aaKnown RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 SERINC4A6NH21 518 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 E9PI62 339 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 INMT-MINDY4F8WBC2 141 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 J3QLW9 94 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 IGKV1D-16P01601 117 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 C1QBP02746 253 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 CSTBP04080 98 aaKnown RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 NGFRP08138 427 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 CTSEP14091 401 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 ST6GAL1P15907 406 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 ZNF19P17023 458 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 RAB3BP20337 219 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 DIO1P49895 249 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 HSD17B7P56937 341 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 PRPS1P60891 318 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 RPS4XP62701 263 aaKnown RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 PITPNAQ00169 270 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 E2F1Q01094 437 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 CSTF1Q05048 431 aaKnown RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 STX4Q12846 297 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 MRPL28Q13084 256 aaKnown RBP7.12□□□□□ -1.27
CXCR4-201ENST00000241393 SERTAD2Q14140 314 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 FZD2Q14332 565 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 INSL4Q14641 139 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 CDK5R1Q15078 307 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 PON3Q15166 354 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 YIF1BQ5BJH7 314 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 KIRREL2Q6UWL6 708 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 B3GLCTQ6Y288 498 aa7.12□□□□□ -1.27
CXCR4-201ENST00000241393 DGAT2L6Q6ZPD8 337 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms